Ctenopharyngodon idella (grass carp): 127506483
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Entry
127506483 CDS
T08802
Name
(RefSeq) nephrocystin-3
KO
K19360
nephrocystin-3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127506483
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
127506483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_NPHP3
TPR_12
NPHP3_hel
TPR_10
NPHP3
TPR_1
TPR_7
TPR_8
TPR_2
TPR_MalT
TPR_16
TPR_14
NPHP3_N
TPR_11
TPR_6
AAA_16
TPR_19
NACHT
AAA_22
14-3-3
AAA_14
Uso1_p115_C
DUF2225
IFP_35_N
Viral_helicase1
AAA
KAP_NTPase
DUF4635
XRCC4_CC
Pox_H7
Motif
Other DBs
NCBI-GeneID:
127506483
NCBI-ProteinID:
XP_051739003
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All DBs
Position
23:21372007..21414812
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AA seq
1303 aa
AA seq
DB search
MGTASSLVSPGEVIEDAYGGEGGEACEIPVEVKPKARLLRSSFRRGPRVIGASFKSTGSV
ELEYAAEYERLRKDYEIFRVSKNNEIASMQKKEAKLDEENKRLRAELQALQKTYQKILRE
KESALEAKYQAMERAATFEHDRDKVKRQFKIFRETKEKEIQDLLRAKRDLESKFQQLQAQ
GIQIYDPADSDSDDNHTTVTTAGTQCEYWSGGVLGSEPSMGSMMQLQQTHRGPEFAHSLI
DVEGPFANVSRDDWDAAVASLLQVSPHVSQALWSNTVRCYLIYTQETKAELHTFIQTHSL
KLQRFCEGLGHFCLNVSFPEEKAALYAAERRQEIERSSVCVLLLKSSVSSCVVEDVEEAF
VKTPDSRPLLLYLRTGDRKGEKEEVSTLSPATRDLLERINKADKSAKLKVVDHAGSVEEG
ADLIFSHLERIIKQELLGLEVEESGTEEEREEEDSGDVLWDLHDEQEQIEAFQQACSAAA
RFSFQKYVDRLNDMVAAPPPTPPLLVSGAPGSGKSLLLAKWIELQQKNSPNTLILYHFTG
CPLSTSTDPVLIIKRLTVKLLQHFWSISGLSMDPSKILEEFPRWLERLSARHHGNIIIII
DSIDQIQNAERHMKWLIDPLPANVRVLVSVNVETCPQAWRLWPTLHLDPLNPREVKSVIS
TECVNTNLKLTKDQEKKLERHCRSAATCNALYISLLARLITHSRSSWTLDRTLQQCALCQ
DTVSLYRLGLKLSLDSLSTDQEKHIMKELLCLVCASHNGISESEALELFPDLSFPALTSL
LYNLERLLIVTYACGLIRFQHPQACEAVNQEFLEGGKCCGSYREKIIQFFSQQLEQDRVT
WRVADELPWLLQQQEDQSKLQMSLLNLFVSQNLYKRGHFSELLAYWQFVGKDKCSMATEY
FDSLKEFEKSCESEQSMSRLANLYETLGRFLKDLGLLSQAVAPLQRSLEIRETALDPDHP
SVAQSLHQLAGVYVHWRKFGNAEQLYKQAMEICENAYGPEHSTVARELDSLSLLYQKQNK
YEQAEKLRKRSVKIRQKTARQKGHMFGFALLKRRALQLEELTLGKDSADCAKTLNELGVL
YYLQNNLDAAKMFLTRSLEMRQRVLGPDHPDCAQSLNNLASLHSERKEYENAEELYEKAL
DIRKRALAPDHPSLAYTLKHLAMLYKRRGKLEKAVPLYELALEIREKSFGPKHPSVATAL
VNLAVLYCQLKQHSDALPLYERALKVYEDSLGRLHPRVGETLKNLAVLSYEEGDFEKAAE
LYKRAMEIKEAEPSLVCGKAPSHHSSSGDTFSLRSPALPHTSR
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgggtacagcatcctctctggtgagccccggtgaggtgattgaggatgcgtacggtggt
gagggaggagaggcatgtgagataccggtggaggtaaagccaaaagcacgtctgctgcgg
agctccttccgccgcgggcctcgtgtcatcggtgccagcttcaaatccaccggatcggtg
gaactggagtatgcggcagagtatgagcgcctcaggaaagactacgagatcttcagggtc
agtaagaacaatgagatcgcctccatgcagaagaaagaagccaagctggatgaggagaac
aagaggctgcgtgctgagctacaggctcttcagaagacttaccagaagattcttagagag
aaggaaagtgccctggaggcaaagtatcaagccatggagagagctgccacctttgagcat
gaccgagacaaggtcaaacgtcagtttaagatatttcgggaaactaaagaaaaggaaatt
caggatttgctgcgggcaaaacgagatctggagtcaaaatttcaacagctgcaggctcaa
ggcattcaaatttatgatccagcagactcagattcagatgacaaccacaccactgtcacc
accgcaggaactcagtgtgagtactggagtggtggtgtgttgggcagcgaaccgtctatg
ggcagtatgatgcagttacagcagacacacagaggtccagagtttgctcacagtctcatc
gatgtggaagggccttttgccaatgtcagcagagatgattgggatgcagccgtggcaagt
ctgctgcaggtttctcctcacgtctctcaggctctgtggagtaacacagtccgctgctac
ctcatatacacacaggagaccaaagcagagctgcatacctttatacagactcattctttg
aagctgcagaggttttgtgagggtttaggtcatttctgcctgaacgtgtcatttcctgaa
gagaaggcagctctatatgctgctgaacgcaggcaggagattgagaggagctctgtgtgt
gtgctgctactcaagtcctcagtgtccagttgtgttgtagaggatgtggaggaggcattt
gtgaagacaccagactctcgtcctctcttgctgtatttacgtacgggtgacagaaaagga
gaaaaggaagaagtgtccaccctcagtccagccaccagagacctgctggagaggattaac
aaagctgacaaaagtgccaaactcaaggtagtggatcatgcagggtctgtagaggaagga
gctgatcttatcttctctcatcttgagagaattatcaaacaggagttgttgggactggag
gtagaggagagtggaacagaggaggagagggaagaggaagactctggtgatgtgctgtgg
gatcttcatgatgagcaggagcagatcgaggcgttccagcaggcctgcagcgctgctgcc
agattcagcttccagaagtatgtcgaccgactcaatgacatggtagccgccccaccgccc
accccaccactgctggtgtctggtgcacctggatcaggcaaatctcttttgctggctaaa
tggatagagttacagcagaaaaactctcccaataccctcatcctttatcacttcacggga
tgtccgctttctaccagcacagatcctgtgctcatcattaaacgtctcacagtgaagctg
cttcagcatttctggtctatctccggcctctctatggacccttctaagatcctcgaggag
ttcccacgctggctagagaggctttccgcacgtcaccatggcaacattataattatcatt
gactccattgaccagatacagaatgccgagcggcacatgaagtggctgattgatcctctt
cctgctaatgtgagagttctggtgtcagttaatgtggagacctgcccacaggcatggaga
ttgtggcccacactgcacctggacccactcaatcctagagaggtgaagagtgtcatcagt
acagagtgtgtgaacaccaacctcaaactcaccaaagatcaggaaaaaaagttggagaga
cactgccgttcagctgcaacatgcaatgcactctatatctctctactggccagactcatt
acacactccagatcctcctggacgttggacaggactctacaacagtgtgcgctgtgtcaa
gatacagtatcactatacagactgggcctgaagttgtcgctagactcactcagcacagat
caggaaaaacacatcatgaaagagttattatgcctggtatgtgccagtcacaatggcatc
agcgaatcagaggctttggagctgttcccagacctcagttttcccgctctcacctcactg
ctctacaatctggagagacttctcattgttacttacgcctgtggcctcattcgctttcag
cacccacaggcatgtgaagcagtcaaccaagagtttctggaagggggcaaatgctgtgga
tcctacagagagaaaatcatccagttctttagtcaacagcttgagcaagatagagtgacg
tggagggtggctgatgagttgccatggttactgcagcagcaggaagatcaaagtaaactc
cagatgagtctgcttaacctgtttgtgtcccaaaacctctacaagaggggtcatttctca
gagctgctggcgtactggcagtttgttggtaaggataagtgctcgatggcaaccgagtat
ttcgactcactgaaggagtttgagaagagctgtgagagtgagcagagcatgagccgactg
gctaacctgtacgagacgctgggccgtttcctcaaagacctgggactgctcagccaggcg
gtggcccccttgcagcgctccttagagatccgtgagacggctctggacccagaccaccca
agtgtggctcagtccctgcaccagctggcaggggtttacgttcattggagaaaatttgga
aacgcagagcagttgtacaaacaagctatggagatttgtgaaaacgcttatggacctgaa
cacagcaccgtcgctagagaactagactcactttcgctcctctaccagaaacaaaacaaa
tatgagcaggctgagaagttgagaaagagatcagtcaagatcagacagaagacagcacga
cagaagggccacatgtttggtttcgcactattgaagagacgggcactgcagttagaggaa
ctgactcttggcaaagactccgcagattgtgccaagactctaaatgagcttggagtgctt
tattacctacagaacaacctggatgctgcaaagatgttcttgacccgatccctggagatg
cgtcagcgcgtactggggccggatcaccccgactgtgctcagtctctgaacaacctggcc
tcgctccacagtgagagaaaagagtatgagaatgccgaggagttgtacgaaaaagcacta
gacatccgcaaacgagctctcgccccagatcacccatctcttgcttatacactcaaacac
ttggccatgctctacaaacgcagggggaagctggaaaaggcagttcctctatatgaacta
gctcttgagatcagagagaaaagcttcgggcccaaacaccccagtgttgctaccgctttg
gttaacctcgcagtgctctattgccaactgaagcagcacagtgatgcactgcctttgtat
gagcgtgctctaaaggtatatgaggacagtcttggccgactgcaccctcgtgtcggagag
actctgaaaaacctggctgtactcagctatgaagagggagattttgagaaggctgctgaa
ctgtacaagcgagcaatggaaataaaggaggcagagccgtctctggtgtgtggtaaagcc
ccctcacatcactcatctagtggcgacacctttagccttcgaagccctgcccttcctcac
acctctaggtga
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