Ctenopharyngodon idella (grass carp): 127507573
Help
Entry
127507573 CDS
T08802
Name
(RefSeq) F-box/LRR-repeat protein 14 isoform X1
KO
K10275
F-box and leucine-rich repeat protein 9
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127507573
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127507573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
LRR_6
F-box-like
LRR_RPS2
F-box
F-box_5
LRR_8
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
127507573
NCBI-ProteinID:
XP_051740735
LinkDB
All DBs
Position
24:16884874..16893534
Genome browser
AA seq
644 aa
AA seq
DB search
MESPHLPTEIISYILSYLHVTDRKEASMVCKSWYEASQDHRFQKNVTFKFPVSTSSLDFI
RALERRPRCGLVISHLDGSSLSRQILLEVGLHLGSRLDSLALPGSSIIESSLLGLLPHLT
GLRKLDLHGLDSLFMSGAFLSRQEHRQQVQNALGNLEELDLSDLRYLSDLSFNRLTSCTP
RLRRLALAGCHIAFEFDPYRGSPVGSGSSALVSLRNLLSLLQKQASTLRSLDLSRTSITP
ESLRSIAQVPGLRLEDLSLRGCKELTDYSMEILCKHQSGLKTLDVRACTELTSRTVLAVA
TDLKELQSLSLSQDWKITDKGLTELMALPCLRTLDLSECLHVSGADLVKGLSSPQPRAQL
QALSLRNCSYIRDTAMFSLTQLLGSNLRKLDLTSCVYLTDISVRAIATYLPALVVLRLGW
CKEISDWGLLGMVEPTKNCEPRDKEEDKGPSFTRTFGNMGFFQPPSLPFQEKPRLVTDED
LGAFRDQEGASLLALRGLQELDLSACSKLTDTSITQVLRFPDLQRLSLSMLPEISDESLV
SVALHCRNLTSLALNLCPQISDQGMARALPLLHRLQHLFLACCDGVTNETLSIIALHCDR
LRTLDVSMCKDITVHQVELLQSRLPFLEKVQCRFANGADFTMVL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccacacctacctactgagattatctcctacatattgagttaccttcatgta
acggatcgaaaggaagcgtcaatggtctgtaagagttggtacgaagcaagccaagaccac
cggtttcagaaaaatgtcaccttcaagttccctgtttccacatcttcactggactttatc
cgtgcacttgaaaggcgccctcgctgtggcctagtcatcagtcatcttgatggatccagc
ctgtcaagacaaatacttttggaagtggggcttcacctcggctctcgtttggacagtttg
gctctacccggcagcagcatcatagagtcttccctgctgggcctcctaccacatctgacc
ggcctccgcaagctggaccttcatgggctggacagcctctttatgtctggagcttttttg
tcaagacaggagcaccgtcaacaggtccagaacgctttggggaacctggaggaactagac
ttgtctgatctccgctacctctcagatctctctttcaaccggctgacgagttgcacgccc
aggttacgcagactggccctggccggatgccacattgctttcgagtttgacccataccga
ggtagcccggtcgggtctggctcctccgctctagtttccctccgtaaccttctgagtctc
ttgcagaagcaggcctccacgctccgcagcctggacttgagtcgcaccagcatcaccccc
gagtcccttcgctccatagctcaagtgcccggcctccgtctggaggatctgagtctacgc
ggctgtaaagagctgaccgactactccatggaaatcctctgcaagcaccagagcggtctg
aagacgctggacgtcagggcgtgcactgagttaaccagtaggacagtgcttgctgtggca
actgatctgaaggagctgcagtcgttgtcgctgtcacaggactggaagataacggataaa
ggccttactgagctgatggcgctgccttgcttgaggactctggatctgtcggagtgtctg
cacgtcagtggtgcagacctggtgaagggattgtcctctccacagcccagggcgcagctg
caggctcttagccttagaaactgctcatacataagggacacagccatgttctccctgacg
cagctgctcggcagtaacctgagaaagctggacctcacctcctgcgtctatctaactgac
attagtgttcgcgccatcgcaacctacctccctgcactggtggtactgcggctcggctgg
tgcaaagagatctccgattgggggctgctggggatggtggagcccaccaaaaattgtgaa
ccaagagacaaagaggaggataaaggcccaagctttactaggacgtttgggaacatgggc
ttttttcagcctcccagcctgcctttccaggagaagccacgtctcgtaaccgatgaggac
ctgggggcgtttagagatcaggaaggagcatcactgctggccctcagaggtcttcaggaa
ctggacctgtcggcctgctcgaagttaaccgacaccagtatcacacaggtacttcgtttc
ccagacctgcagcgcctctcgctttctatgctgcctgagatcagcgatgaaagcttggtg
tccgtcgcccttcactgccgcaacctcacaagcctggcgctcaacctctgtccccagatc
agtgaccaaggtatggcgcgggcccttccgctcctccacagactgcagcatctgttcctg
gcctgctgcgacggtgttactaatgaaactctttccataattgcgctgcactgcgacaga
ctcaggaccctcgatgtgtccatgtgcaaggacataacagtgcaccaggtggagctcctc
cagtcccggctacccttccttgagaaagtccagtgtcgctttgccaatggcgcagacttc
actatggtactatga
DBGET
integrated database retrieval system
