Ctenopharyngodon idella (grass carp): 127508107
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Entry
127508107 CDS
T08802
Name
(RefSeq) protein NLRC3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127508107
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127508107
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
SPRY
LRR_6
SAM_KSR1
LRR_4
Motif
Other DBs
NCBI-GeneID:
127508107
NCBI-ProteinID:
XP_051741710
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All DBs
Position
3:complement(16501498..16510066)
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AA seq
984 aa
AA seq
DB search
MSLHDKKECEFSDATVTSDPSISRTKRERSESVKTNNSMTEPLKFSNGPVTSEPLGEIHE
THNQTYIRKDNTEAFLQTLKLETGDLQLVKDQHKTSMKNKYERLFEGLKLQENETLLNRI
YTQLYIIEGESEGVNKQHEVLQMEKTARTQHSQDTPINCNDIFKASPEPGCKEKHQIKTV
LTKGIAGIGKTVSVQKFILDWAEEKDNQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHP
ELQDLDSKIYEECKVVFIFDGLDESRITLMFSDAEKVSDVTETSSVGVLMSNLIRGELLP
SAHIWITSRPAAANQIPSKYINRLTEIQGFNEPQKEEYFRRRISDENQASRIISHIRRAR
SLHIMCHIPVFCWISSTVLQKLLKEDLSAEIPQTLTEMYIHFLLIQINMRNQKYEERDPE
KLLQSNRDVIVKLAEVAFNQLMKGNVMFYEEDLRESGIDVTDASVYSGICTEIFREECVI
HQRKVYSFIHLSVQEFLAALYVFYFYLSTTMEGLKSLVSVQNLLKGAVDKAIESENGQLD
LFLRFLLGVSLESNQRLLQDLLTHTDNSSDSIRETTQYIKDKFKDGHGVSAERSINLFLC
LLEVKDQTLSRQIQEFVKSDKHSEKKLSPAHCSTISYVLQMSEEVLDELDLKKYNTSDEG
RRRLIPAMINCRKALFAGCNLTEQSCEIVTSALQSSNSVLRELDLSNNDLQDSIVKLLSD
GLKSPKCQLEILRLSGCMVTEEGCGYVSSALRSNPSHLRELDLSYNHPGQSGAQLLNDIL
KDPNYKLQILNLDHGGLFRIKSGLQKYACDLTLDPNTANIHLILSEENRKIKYVKDCQPY
PDHSERFAHNPQVLSRESLTGRCYWEVERVSWARIAVAYSGIDREEETVCWFGYNDKSWC
LFCTDNGFVVWHDNESINIPSHLTKSKRVGVYLDWPSGTLSFYSVSDTHPPTHLHTFNTT
FTEPLYAGFGVFKSELSLCQIQQT
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagcctccatgacaagaaagaatgtgaattcagtgatgcaacagtgacctctgacccc
agtatcagcaggacgaagagagagagatcagagtcagtaaagactaacaactctatgacg
gaaccccttaaattcagtaatggaccagtgacctctgaacctctgggggagatacatgag
actcacaatcagacttacatcaggaaggacaacacagaagcattcctgcagacactcaaa
ctggagactggagacctgcagctagtcaaagaccagcacaaaaccagcatgaagaacaag
tatgagagattatttgagggattgaaactccaggagaatgaaaccctcctgaacaggatc
tatacacagctctacatcatagagggagagagtgaaggagtgaataaacaacatgaggtt
ttacagatggagaaaacagccagaacacaacactcacaagacactccaatcaactgcaat
gacatctttaaagcctcacctgaaccaggatgtaaggagaaacaccagatcaagactgtt
cttactaaaggcatcgctggaatcggaaaaaccgtttctgtgcaaaagttcattctggac
tgggctgaggaaaaagacaatcaggatgtagatttcatgtttgtgcttccatttcgagag
ctgaacttgatccgagatcatcagtacagtcttcacagacttctgctggactttcatcct
gaacttcaagatctggactcaaagatttatgaggagtgtaaagttgtgttcatctttgat
ggtctggatgaaagcagaatcacactgatgttttctgatgctgagaaagtttctgatgtg
actgagacttcatcagtgggtgtattgatgtcaaacctcatcagaggagagctgcttccc
tctgctcacatctggatcacctccagacccgcagcagccaatcagatcccctcaaaatac
atcaaccgtctgacagagattcagggattcaatgagcctcagaaggaggaatatttcagg
aggagaatcagtgacgagaatcaagccagcagaatcatctcacacatcagaagagcaaga
agcctccacatcatgtgccacatacccgtcttctgctggatctcatccactgtgcttcag
aagctcctgaaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtacatc
cacttcctgctgattcagatcaacatgaggaatcagaagtatgaagagagagatcccgag
aaactcctgcagtccaacagagacgtgattgtgaaacttgctgaagtggctttcaatcag
ctgatgaagggtaatgtgatgttctatgaggaggacctgagagagagcggcatagacgtc
actgatgcctcagtgtattctgggatttgcactgagatatttagggaggaatgtgtgatt
catcagaggaaagtctacagcttcattcatctgagtgttcaggagtttcttgctgcactt
tatgtcttttacttttatctaagtacaacaatggagggactgaagagtttagtttcagta
caaaatctgcttaaaggagcagtagataaagccattgagagtgaaaatggacagctggat
ctgttcctgcggttcctgctgggcgtctcattggagtccaatcagagactcttacaggat
ctactgacacacacagacaacagttcagatagcatcagagaaaccacacagtacattaaa
gacaagttcaaagatggacatggagtctccgctgaaagatccatcaatctgttcctctgt
ctgctggaagtgaaagatcagactctgtccagacagattcaggagtttgtgaaatcagac
aaacactcagagaagaaactctctcctgctcactgctcaacaatctcctacgtgcttcag
atgtcagaggaggtgctggatgagctggacctcaagaaatacaacacatcagatgagggt
agaagaagactgataccagctatgatcaactgcagaaaagccctttttgctggctgtaat
ctcaccgaacagtcatgtgaaattgtgacatcagctcttcaatcctcaaactctgtcctg
agagagctggacctgagtaacaatgacctgcaggattcaatagtaaagctgctctctgat
ggattgaagagtccaaaatgtcagctggagatactgaggttgtctggctgtatggtgaca
gaggaaggctgtggttatgtgtcttcagctctgagatcaaacccctcacacctgagagag
ctggatctgagctacaatcacccaggacaatcaggagcccaactgcttaatgacattctg
aaggatccaaactacaaactgcagatactcaatttggatcatggagggctcttcaggatc
aaatcaggattacaaaaatatgcctgtgatctcacactggatccaaacacagcgaatatt
cacctcattctgtctgaagagaacagaaagattaaatatgtgaaagattgtcagccgtat
cctgatcattcagaaagatttgctcataatcctcaggttctgagtcgagagagtctgact
ggacgctgttactgggaggttgaacgggtctcctgggctcgtatagcagtggcctactca
ggaatcgacagggaagaagagactgtctgttggtttggatacaatgacaaatcctggtgt
cttttctgcactgataatggatttgttgtctggcacgataacgagagcattaacataccg
agccatttaacaaaatctaagagagtaggagtgtatctggactggccgtccggcactcta
tccttttacagcgtctctgacacacacccaccaacacacttacacacattcaacaccaca
ttcactgaacccctctatgctggatttggggtttttaagtctgaactgtcactgtgtcag
attcaacaaacatag
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