Ctenopharyngodon idella (grass carp): 127509363
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Entry
127509363 CDS
T08802
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127509363
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
127509363
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
OCIA
Motif
Other DBs
NCBI-GeneID:
127509363
NCBI-ProteinID:
XP_051743968
LinkDB
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Position
3:complement(42927975..42939847)
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AA seq
506 aa
AA seq
DB search
MADSDTSTDAHKLNVYQELLSPSELFEARSRSHKIPVRGQKDFLPDGSEKQTAHLQQSLD
EHWTLLTEERVERLGNLVKAVWIPEEALVELQSPAGKFWQTMGFSERGKQYLRPEEALYL
MECGNVQVFYRDLPLSIQEGYERFLSCETVTLHQYQVFGHLKRLGYVVNRFDPSSVPSTY
ERQLNLPASSWDKQRKQLKRKRSQSPVSSEKQNTSPVEKTTAEDQSDELVKSSESPAATD
LSPQEPLQSAEASDRTWWIEGDVQPPPAQAQSTAPRWDFSSISFPDLGSRRSRSVCLASP
DRSLLPGALEVGDCDVTPWLSRLNMKQEKLSRRDRERQRERDRYHRDVNSDREVRRCRNW
AEYLQLLEERRRRRQKDRPAHLWEREVKPLTQPGQCASHRELLDQISIVKSSSWSEGVSR
LSPSDQWKISFDVYQPDTVAEFKKSHPGKPYSRMCVCSFDGPVPDLHAMKQLSFQSGDVP
VTFAVVDHGDISFYSFKDFKLPTDVY
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcagacagcgacacatctacagatgctcacaaactcaatgtttatcaggagttgctc
agtccatcagagctgtttgaggcgaggtcccggagccataagataccagtgaggggtcag
aaagacttcctgcccgatgggtccgagaagcagacggcccatctgcagcagagtctggac
gagcactggacgctcctgaccgaggagagggtcgagagactagggaatctagtgaaagct
gtctggatccctgaggaagcactagtggaattacagtcaccagcagggaaattttggcag
acgatgggtttttcagagagaggcaagcaatacctgcgccctgaagaggctctctacctc
atggaatgtggcaatgtgcaggtgttttaccgggaccttcctttgtccattcaggaggga
tatgagcgctttctctcttgtgagactgtgactcttcatcagtatcaggtttttggacat
ttgaaaaggcttgggtatgttgtgaacagatttgaccccagttcagtcccgtccacatat
gagagacagctgaatctgccggcatcatcatgggacaagcagagaaaacagctgaagagg
aaacgctctcaaagtcctgtatccagtgaaaaacagaacacgtcaccagtggagaagaca
acagctgaagaccaaagtgacgagctagttaagagcagtgaatcgccggcggccacagat
ctgtctccgcaggagcccttgcagtctgctgaggcctctgacaggacgtggtggatagaa
ggggatgtccagcctccacctgctcaagcccaaagcacagctcctcgatgggacttcagc
agcatctctttcccagacctgggctctcgtaggagccgctcggtctgcctggcttctcca
gaccgaagcctgctgcctggcgctctggaggtgggcgactgtgatgtgactccttggctc
agcagactcaacatgaagcaggagaagctgtcgcgccgggacagggagcgccagagagag
cgagatcgctaccacagggatgttaatagtgaccgagaggtgcgacgctgcaggaactgg
gcggagtatttacagctgctggaggagaggaggcggcggcggcagaaagatagacccgcg
catctgtgggagagggaggtgaagccgctcactcagcccggccagtgcgcctcacaccgt
gaactgctggaccagatcagcattgtcaagtcttcaagctggtctgagggggtatccagg
ttgtccccgtcagaccagtggaagattagttttgatgtttaccaaccggacacggtggcg
gagtttaaaaagagccaccccggaaagccttatagccgcatgtgtgtctgcagtttcgac
ggtcccgtgcctgatctgcatgccatgaagcagctgtccttccaaagtggagatgtccca
gtgacgtttgctgtggtggatcatggtgacatctctttttacagcttcaaggatttcaaa
cttccaactgatgtgtattaa
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