KEGG   Ctenopharyngodon idella (grass carp): 127512253
Entry
127512253         CDS       T08802                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cide04121]
    127512253
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     127512253
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_VPS8
Other DBs
NCBI-GeneID: 127512253
NCBI-ProteinID: XP_051748949
LinkDB
Position
5:25547360..25570367
AA seq 1734 aa
MAAEPCSQIEAELYYLIARFLQSGPCQKSAQMLLQEMHEYEIIPKRWSWDGKLFKRSFED
WVVLNQHIPSDYLLRVCEQIGPLIDKHIPPSVPGVHSLLGTGRQSLLRTAKSSSHTVWSG
SAVVALHRGRPPEPPINCAKTPNIVSIMGARQKTGVARFGHAFPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGQRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDLTVNFENTLLAS
ASCDKIIRVWCLRTCAPVAVLQGHTASITSIQFSSSALGSSRYLATTGADGMVCFWQWNS
LSMKFVDKPVKFMERSRPGVQISCSSFSSGGMFLATGGTDHMIRVYYLGTETPVKFSDLD
SHTDKVVAIQFCNNTDSLRFVSGSRDGTARIWHYQQQEWKSIVLDMTTRLPGSAVISGDD
KSTKLVVTMVAWDRCDRSIITAVSNCLLKVWNSANGQLLHVLSGHDDEVFVLEAHPFDSR
ILLSAGHDGNIYIWDLSKGQKIRNFFNMIEGQGHGAVFDCKFSVDGQHFACTDSHGHLLI
FGFGCSQPYEKIPDQMFFHTDFRPLIRDSNNFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
LYQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTAEDSQEESPLDDLIRQLQHH
QDEQRNSGNPAAGAEVAGGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQMATERDLLAWSR
RVVVNEVQSGIFRVMEESRLAKGEVERFFYNTEKKRKSTPTTGSEPVGNSVRMLRRPQRR
PQQRRHTYQTRSTRDRRRSTSVLSYTRNEESARESDSEAEQEEDQNENSDGSSDEAQWEN
DSSSSDSSSEYSDWTADAGINLQPPKRTTRRPAPVVGSSSSEEDEGTGQGEGEAERRSKR
TEKKKKPKQTKQRPVPAGELDEWLPPSWIMETIPRRSPFVPQMGDELIYFRQGHQAYVRA
VCRAKAYSINPQKQPWNRFDLRDQESVKVVGIKYEVGPPTLCCLKLAFLDPTSGKMTNES
FSLKYHDMPDVIDFLVLQQIYNEAKARNWQPGQRFRSIIDDAWWFGSVECQEPFQSEYPD
SLFQCYIVRWDNGEREKMSPWDIEPIPEEAPVPEEVGDSVPVTEDELQSLLYSPQEGEWG
LHTQDEECERVITAIDQLLTLDVAKPFSCPVDLREYPLYCTVVAYLTDLSTIRTRLVHRF
YRRISALMWEVRYIEHNARTFNEPQSPIVTAAKTVTDVLLRFIRDQSCTDILDLYNKMKT
EFSSAGEEEETVDVDSDTPGTSTGQRRSSNVPQKRGVVLDINAWHKQCKELLRRMMASPD
SEPFRQPVDLFTYPDYRDIIDTPMDLGTVSETLMGGNYENPIEFAKDVRLIFSNSKAYTP
NKKSRIYSMTLSLSAFFENQIIPIISDYKSAVQNQRRSQQRLKRLQSSLPNSPKGKQKSG
KKTSQTSAKSRSRKSSQDLSVAQADEDSQPSSSSSSSSSSSSTSFSSEHAGANRVTRSRV
TPSKSSGGNDCLSNGGRSSRRRRAALTEEGEVSECESTSSSSSSTSASASSSSGTSSSSS
ESDDSGTELGGFADGGDHDYSKAPQHKQKGKEAAVSVDNAKRKRKGEEQTTEPEKRARRE
AEREEEEEPEEEEEPDEEEEPEEEEEELDEEEEESDEEDLTSSSKTGSQRSNQRTQKTGR
VNTRNQGRRTVLYNDDSEEEGLTTDPLNLGMSRSGRVRRMTERARVSHLMGWTH
NT seq 5205 nt   +upstreamnt  +downstreamnt
atggcggcggaaccgtgctcgcagattgaagccgaactttattacctgatcgccagattc
ctgcagtctggaccatgtcagaaatccgctcagatgctgctgcaggagatgcacgaatat
gagatcatcccgaagcgctggagctgggatggaaagctgtttaagcgaagctttgaagac
tgggtggtgttaaatcagcacataccttctgattacctgctgcgtgtgtgtgagcagatt
ggcccactgatagataaacacattcctcccagtgttcctggagtccacagtttactgggc
actggacgacagtcattactacggacggcaaaaagttcttctcatacagtatggagtggt
tctgcagtagtcgccttgcacaggggacggcccccagaaccacctataaactgtgccaaa
acaccaaatatagtgtcaatcatgggtgctcgccaaaaaacaggagtggctcgatttggc
cacgccttcccctcctgcacctaccagcacatgaaaatgcatcggaggattctgggccat
ctctcatcagtgtactgtgtggcatttgaccgcactggacaacgcattttcacgggttct
gacgattgtctagtgaagatctgggcaacagatgatggccgtctgctagccactctgcgc
ggacatgcggcagagatttcagatttgacggtgaatttcgagaacacgctcctcgcttcc
gccagttgtgacaagatcatccgcgtgtggtgcctgcgaacctgtgcacctgtggctgta
ttgcaggggcacacagcctccatcacctctatacagttttcttcatcagcattaggttcc
tctcggtatctggccaccactggagctgatggcatggtgtgcttctggcagtggaactca
ctcagcatgaagtttgttgataaacctgtaaagttcatggaacgttctcgtcccggagtt
cagatatcctgcagctccttcagctctgggggaatgtttctggccactggaggcacagat
cacatgatcagagtttactacctcggcacagagacgcctgtgaagttttctgacctggac
tcccacacggataaagttgttgctattcagttctgcaataacaccgacagtctcaggttt
gtgagtggtagtcgggatggtacagctcggatttggcattaccaacagcaagaatggaag
agtattgtactggacatgaccaccagattaccagggagtgctgtgatatcaggcgatgat
aaatcgacaaagttggtggtgacaatggtcgcgtgggatcgttgcgaccgttccatcatc
acagccgtttcaaactgcctcctcaaagtctggaactcagcaaacggccaattactacat
gtgctgtcgggtcacgatgatgaggtgtttgttttggaagcacacccctttgactcacgg
atcttgttatcggctggtcatgatggtaacatctacatttgggacctcagcaaaggccag
aagatcagaaactttttcaatatgattgagggccagggacatggtgctgtgtttgattgt
aaattttcagtggatgggcagcactttgcatgcacagactctcatggtcatctgctcatc
ttcggctttgggtgcagtcagccttatgaaaagattccagaccaaatgttcttccatacg
gattttcggccattgatccgggactccaataattttgttctagatgagcagacgcagcaa
gcaccccatcttatgcctccgcctttcctggtggacgtggatgggaatccccacccgcct
ctttaccagcgcctggtgccaggcagagaaaactgcaaagaggagcagcttgtgccacag
ctcggctacatggctaatggtgatggcgaagtggttgagcaggtgattggccagcagacc
gcagaggattctcaggaagaaagcccattggatgacttgattaggcagctccaacaccac
caagatgagcaacgcaactcaggaaatcctgctgcaggtgctgaggtggcaggtggtcct
ctgtcaccccctaacgtcggactgcgacgtagcggacaagttgagggtgtacggcagatg
cacaacaatgccccccgcagtcagatggccactgagagagacctgttggcatggagccgg
cgtgtggtggttaatgaagtccagtctggcattttcagagttatggaggaaagtaggctt
gctaaaggagaggtggaacggtttttttacaacactgagaagaagagaaaatctacaccc
acaacaggaagtgagccggtgggtaacagcgttcgcatgttacgaaggcctcagcgcagg
cctcagcagaggagacacacgtatcagacccgctcgactcgagataggagacggagcaca
agcgtgctttcgtacacccgaaatgaggaaagtgcaagagagtccgacagtgaagcagag
caggaagaggaccagaatgagaacagtgacgggtcctctgatgaagctcagtgggagaat
gacagtagctccagtgactcttccagtgagtattcagattggacggcagatgcgggaatc
aaccttcagccccccaagcgaacaaccagaaggccagcccctgtcgtcgggagcagtagc
tctgaggaagatgaagggacagggcagggagaaggggaggctgagaggaggagtaaacgg
actgaaaagaaaaagaaaccgaaacagactaaacagcggcctgtgcctgctggagaatta
gatgaatggttgcccccctcttggatcatggaaacaattccaagacgatcacctttcgta
cctcaaatgggagatgaattgatatatttccgtcagggtcatcaagcatatgtccgagcc
gtgtgtcgtgccaaagcctacagcatcaaccctcagaaacagccctggaaccgctttgat
ctcagggatcaggagtctgtaaaggtagtgggtattaaatatgaagtcgggccacccact
ctgtgctgcctcaaactggccttcctggaccccacctcagggaaaatgactaacgagtcc
ttcagcttgaagtatcatgatatgcctgatgtcattgactttctggtgctacagcagatt
tataatgaggccaaagcacgaaactggcagcctggtcagcgtttcaggagcatcattgat
gatgcctggtggtttggttcggtggagtgtcaagagccgtttcagtctgaatatccagac
agcctgtttcagtgctacattgtcaggtgggataatggagagagagaaaagatgagtccg
tgggatatagagcccatacctgaagaagctccagtcccagaggaggttggggacagtgtt
ccggtcacagaggacgagcttcagtccctactgtacagcccacaggagggagagtggggg
ctgcacacacaagatgaagagtgcgagagagtcatcacggccatagatcagctgcttacg
ctcgatgtggcaaagccattctcctgccccgtagatttgagggaatatccgttgtactgc
actgttgtggcctatctcactgacctcagcaccatcagaacaagattagtgcaccgtttc
tacaggcgaatctcagcgcttatgtgggaggtgcgttacatcgaacacaatgctcgaaca
tttaatgaaccacagagccccatcgtcacagcagcaaaaacggtcacggacgtcctgctg
cgtttcatcagggatcaaagctgtacagatattttggatctgtacaataagatgaagacc
gaatttagcagcgcaggagaggaagaggagactgtggatgtggactcagacactcctggc
acctccactggtcagaggaggtcgagtaatgtgcctcagaagcgtggcgtggtcctagat
ataaacgcatggcacaaacaatgcaaagagcttctgaggagaatgatggcaagcccagat
tcagagccattccgccagcctgttgacctcttcacctatccggattatcgtgatattata
gacactcctatggatttgggcacggtctctgagaccctcatgggtgggaactatgagaat
cccatagagtttgccaaagatgtgcggcttatcttcagtaattcaaaggcctacacgccc
aacaagaagtctcgaatctacagtatgactctgagtctgtcggcgttctttgagaatcag
atcattcccatcatttcagactacaaatctgctgttcagaatcagcgtaggagtcaacag
agactcaagagattacagagttctcttcccaacagccccaaaggaaaacagaaatcggga
aagaaaacctcccagacttctgcaaagtcccgctcaaggaaatcctctcaagatttaagt
gttgcacaagctgatgaagacagtcagccttcctcttcgtcttcatcctcttcctcctca
tcttccacgtctttttcatcagagcatgcaggagccaacagagttacacgcagccgagtt
acaccaagcaaatcctcaggtggcaatgactgcctgtcaaatggaggtcggagttcacgt
aggagaagagctgcattaacggaagagggagaggtctctgaatgtgagagtaccagctca
tcatcatcctcaacatccgcttcggcatcgtcctcttccggaacctcgtcatcttcgtcc
gagagcgacgacagcgggacggagttgggcggctttgcggatggcggcgatcatgactac
agcaaagccccgcaacataaacagaaaggcaaagaggcagcagtctctgtcgataacgca
aagcgaaagcggaaaggagaagagcaaacgacagaacctgagaaacgagcacggcgggag
gccgaaagagaagaggaggaggagcctgaggaagaagaagaaccagatgaagaggaggaa
cctgaggaggaagaagaggagctggatgaggaagaggaggagtctgatgaggaagacctc
acttcatcatcaaaaactggaagtcagaggtcaaatcaaaggactcaaaaaacagggcgg
gttaatactcgtaaccagggacgaaggactgttctatacaacgatgactctgaagaggag
gggctgacgacagacccactgaatctaggaatgtcacgttctggacgggtccgtcgcatg
actgaacgtgcgagggttagccatcttatgggctggacacattga

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