Ctenopharyngodon idella (grass carp): 127514189
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Entry
127514189 CDS
T08802
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127514189
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127514189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
IQ
Motif
Other DBs
NCBI-GeneID:
127514189
NCBI-ProteinID:
XP_051752692
LinkDB
All DBs
Position
6:complement(8372566..8423642)
Genome browser
AA seq
2021 aa
AA seq
DB search
MAAQLLVPPGPDSFRPFLPESLAAIERRIAEEAAQRPKGERRPDDDDENGPKPNTDLEAG
KSLPFIYGDIPPNMVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RISIRVLVHSLFSFVIMCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVILMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKIPEVNVTENLTATLSYSNG
LERHNSTFNWTEYISDEKNYYYLPGRRDALLCGNSSDAGQCPEGFSCIKAGRNPDYGYTS
FDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAM
AYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQLELSLPLVAPNNGACAVIGWQVAAA
AATESGEYSGRGGLSEESSSGGSRLSSKSAKERRNRRKKRKQREEEEKADQEKFHKSASE
DSIRRSGFRLSIDANRLSYEKKCSTPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDFGS
ENDFADDEHSTFEDSDSRRGSLFVPRCIERRSSTVSHCSLAPRIMLPANGKMHCTVDCNG
VVSLVGGTSVPTSPIGRLLPEGTTTESEARKKRSGSHQPSDYLDETVARKRALSVASILT
NTMEELEESRQKCPPCWYKFANSFLIWDCYPAWLKVKEIVNMVVMDPFVDLAITICIVLN
TLFMAMEHYPMTPGFNHVLSVGNLVFTGIFTAEMCLKVIALDPYYYFQEGWNIFDGIIVS
LSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIV
FIFAVVGMQLFGKSYRECVCKISEDCELPRWHMDDFFHSFLIVFRVLCGEWIETMWDCME
VAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIHK
GIALVKSTLRQFLQSLCLAGSKPRALDEEKPLDDLHSDSKENCLSNHAPVAVDLTKDYLK
EGCVSPGNGVEGHVKYGIEEGDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDV
EGSKEKLPVDAVLSSSEGSTVDIRPPGEGAESVELEPEESLDPEACFTEGCVMRFQCCQV
DVEKGKWKSWWNLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRKTIKTVLEY
ADKVFTYVFILEMLLKWVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKS
LRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYY
HCINITNEEMIPISVVNNKSDCNALIQNNGTARWKNVKINFDNVGAGYLALLQVATFKGW
MDIMYAAVDSRDVELQPDYESNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNKFQGIIFDLITKQAFDIVIMILICLN
MVTMMVETDDQTKEMDDILYWINLVFIVLFTGECVLKMISLRHYYFTIGWNVFDFVVVIL
SIVGMFLSEMIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYAIFGMSNFAYVKKEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLLAPIL
NKQDPDCDSETEHPGSLYRGNCGNPSVGIFFFVSYIIICFLIVVNMYIAVILENFSVATE
ESAEPLSEDDFEMFYEVWERFDPNATQFVEYNKLSDFADALDPPLRIAKPNKIQLIAMDL
PMVSGDRIHCLDILFAFTLRVLGEEGEMDALRGQMEDRFMASNPSKVSYEPITTTLRRKQ
EEMSASVIQRAFRRYRIRQTVKKASKAYRQQLQDGVVHIPEKEVLVIGKFQENSASDKTD
MTPSSASPPSYNSVAKSEKDKYEKERREKEDKAKDARDRKK
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctgctcgttccacccggacctgacagcttccggcccttcttgcccgag
tctctcgctgctatcgagcgccgcatcgcagaggaggcggcccaacggcccaaaggcgag
agacggcctgatgatgatgacgaaaacgggcccaaacccaacaccgatttggaggcggga
aaatccctgccctttatctacggagacattccacccaacatggtgtccgtcccgctggag
gacctggacacctactacagcaaccaaaaaacctttatagtattgaatcgtgggaaggct
atattccgctttaatgctacgccggccttgtatattttgagccctttcaatccattgagg
agaatctccatcagggtcctggtgcattcgctgttcagttttgtgatcatgtgcacaatc
ttgaccaactgcgccttcatgaccctcagcaatcccccggactgggccaagaacgtggag
tacacgttcacagggatctacaccttcgagtccctgattaagatcctggcacggggcttc
tgcgtggggaagttcactttcctgcgagacccctggaactggctggatttcagtgtcatt
ctgatggcgtatgtaactgagtttgtaaacctaggcaatgtgtcagctctccgcactttc
agagtgctcagagctttgaaaactatctcagtcatcccagggctgaagaccatcgttgga
gctctgatccagtccgtgaagaagctgtcagacgtgatgatcctgacggtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagattccggaagtcaatgtcactgaaaacctcactgccacgctgagctatagtaatggc
ttagagcggcacaactccacctttaactggacagagtacattagtgatgagaaaaactat
tattacctcccaggccgcagagatgctttgctgtgtggaaattcaagtgatgcagggcag
tgcccagagggcttctcatgcataaaagcagggcgtaatcctgactacggctacacaagc
tttgacacgttcagctgggccttcctctcactcttccgactcatgacacaagacttctgg
gaaaacctctaccagcagaccctgcgtgcagctggaaagccctatatgatcttctttgtt
cttgtgatctttctgggctccttttatctggtgaatctcatcctggctgtggtggccatg
gcatatgatgagcagaaccaggccaccatagaagaggcccaacagaaagaagaagagttt
caagccatgctggaacagctaaagagacaacaagaagaggcacagcttgaactgagtcta
cccctggttgcccctaacaacggtgcttgtgctgtgattggctggcaggttgccgcggca
gcagcaacagagagtggggagtacagcgggagggggggcttgtcagaggaaagctcctcc
ggggggtccagactcagctccaagagcgctaaagagagaaggaacaggaggaagaaaaga
aaacaaagggaagaagaagagaaagccgatcaggagaagttccataagtccgcctcagag
gacagtatcagacggtctggatttcgattatccatagatgccaaccgactctcatatgag
aagaaatgttccactccaaatcagtctcttctcagcattcgtggatctctcttctccccg
aggaggaacagtcgtgcgagtcttttcagttttcgtggtagagcacgagactttggctca
gagaatgattttgcagacgatgagcacagcacttttgaggatagcgacagtcggcgtggc
tcgctcttcgtacctcgttgtattgagagacgaagttccactgtcagtcactgcagcctt
gcccccaggattatgctcccagccaatgggaaaatgcattgcacagttgattgcaatgga
gtggtgtcactggtgggcgggacatctgtgccaacatcaccaatcggacgtttgttacca
gagggcacgaccactgagtctgaggcacgtaagaaacgttcaggatcacaccagccatct
gattatctggacgaaacagttgccagaaaaagagctctgagtgtggccagcattctgaca
aatactatggaagaactcgaggaatcacggcagaagtgccctccttgttggtacaaattt
gccaatagcttcctgatctgggactgctatccagcctggctgaaggtgaaggagattgtg
aacatggtcgtgatggatccgtttgttgacctggccataaccatctgcattgttctcaac
accctcttcatggctatggaacactaccccatgacaccaggattcaaccatgtgctgtca
gttgggaacctggtattcacaggaatcttcacagcagagatgtgtctgaaggtaattgct
ctggacccatattactacttccaagaaggctggaatatctttgacggcatcattgtaagc
ctgagtctcatggaactgggcctggccaatgttgagggactttcagtgttgcgctccttt
agattgttaagagtctttaagctggcaaagtcttggcccaccctgaacatgctgataaag
attattggtaactcagttggtgctttgggaaatctaaccctcgtcctggccatcattgtc
ttcatattcgctgtggttggaatgcagctgtttggaaagagctaccgagagtgcgtctgc
aagatttcggaggactgcgagttgccgcggtggcacatggacgatttcttccactccttc
ctgattgtattccgagtgctttgtggcgaatggatcgaaaccatgtgggactgcatggaa
gtggcgggacagtcaatgtgtctcatcgtcttcatgatggtcatggtcattgggaatctg
gtggtgttgaaccttttcctggccttgctgttgagctctttcagtgccgataatctcgcc
gccacggatgacgacagcgaaatgaacaatctgcagatcgctgtgggccgaatacataaa
ggtatcgcactggtcaagtcaactttgcggcagttcctccaaagcctctgcctggctggc
tccaaaccacgcgcactagatgaagagaaaccccttgacgacctccacagcgacagcaag
gagaactgcttgtccaatcacgctccggtggccgtcgacctcactaaagactatctgaag
gagggttgcgtttcccctggtaacggggtggaaggtcacgtaaagtatggaattgaggaa
ggcgactacatgtcgttcatacacaatcccagcctcactgttacagtaccgattgcggtg
ggagagtcggactttgaaaatctgaacacggaagatttcagtagcgactcatctgacgtc
gagggcagcaaagagaagctgcctgttgatgcggttctcagttcctcagaggggagcaca
gtcgatatacgaccccctggagagggggcggagtccgtcgagttggagccagaagagtcc
ctggacccagaggcttgctttacagaaggctgtgtgatgaggtttcagtgctgtcaggtc
gatgtggagaagggaaaatggaagagttggtggaatctcaggaaaacctgcttcatcatt
gttgagcacaactggtttgagtcctttatcatcttcatgattttactcagcagtggagca
ttggcttttgaggacatttacatcgagcagcgtaagacgataaagacggtgttggaatat
gcagataaagtcttcacatacgtctttattttggagatgcttctgaagtgggttgcttac
ggcttcgccaaatacttcaccaatgcttggtgctggcttgacttcctgattgttgatgtg
tcgttggtgagtttggtagcaaatgctcttggttactctgaactaagtgccattaagtcc
ctgagaactctgcgtgctcttagacctttgagagcattgtcacgcttcgagggaatgagg
gttgtagtgaatgccctgctgggagccataccttctatcatgaatgtcctgctggtgtgt
ttgatcttctggctgatcttcagcatcatgggggtgaatctcttcgctgggaaatactac
cattgcattaatatcaccaacgaagaaatgattcccatcagtgtggtcaataacaagtcc
gattgcaatgcccttattcaaaacaatggtacggcacgctggaaaaacgtgaaaattaat
ttcgataacgtgggagccggatacctggcactactgcaagtggccacatttaaaggatgg
atggacatcatgtacgcagctgtggattctcgtgatgtggagctgcagcctgactacgaa
tctaacctttacatgtacctatacttcgtcatcttcattatcttcggctccttctttacc
cttaacctcttcattggtgtcatcattgataacttcaatcagcagaagaaaaagcttgga
ggtcaggatatcttcatgacagaagaacagaagaaatattacaatgccatgaagaaactg
ggatctaagaagcctcaaaagccaattcccaggcctacgaacaagtttcaaggcatcatc
tttgacttaatcaccaaacaagccttcgacattgtcattatgatcctgatctgcttgaac
atggtgaccatgatggtggaaactgacgaccagacaaaggaaatggatgatattttgtac
tggataaacctggttttcatcgtcctcttcactggagaatgtgtgctcaagatgatctcc
ctccggcactactacttcaccattggctggaatgtgtttgactttgtagtggtgattctg
tcaattgttggcatgttcctctctgagatgattgagaaatattttgtatcgccaacctta
tttcgagtcatccgacttgccagaatcggtcgcattcttcgtctcatcaaaggcgccaaa
ggcattcgtaccctcctgtttgccttgatgatgtcacttcctgccttgttcaatattggc
ctccttctcttcctggtcatgtttatctatgccatctttggaatgtccaactttgcctat
gtgaagaaagaggcagggattgatgacatgtttaactttgagacatttgggaactcgatg
ctttgtctgttccagatcaccacttctgcaggatgggacggcctcttggcgcccatcctg
aacaagcaagatccagattgcgacagcgaaacagagcacccgggcagcttgtaccgcggc
aattgtgggaacccctcggtcggcatcttcttcttcgtgagctacatcatcatctgcttt
ctgattgtggtgaacatgtacatcgctgtgatcttggagaacttcagcgtagccacagag
gagagtgccgaaccgctcagcgaggatgactttgaaatgttctacgaagtctgggagcga
ttcgaccccaatgctacgcagttcgtggagtacaacaagctttctgactttgcagatgct
ctggatcctccgttacgcatcgccaagccaaacaagatccagctcattgccatggacttg
cccatggtcagtggggatcgcatccactgcctggacatcctgtttgcctttaccctgagg
gtactgggagaggagggtgagatggatgccctgaggggacaaatggaggatcgtttcatg
gcctccaatccctccaaagtctcctacgagcctatcacgacaaccctccgcaggaaacag
gaggagatgtcagcctccgtcattcaaagggccttccgacggtaccgcataaggcaaaca
gtaaagaaggcctctaaagcgtatcggcaacagctgcaggacggggtcgtgcatatcccg
gagaaagaggtgcttgtcattggaaagtttcaagagaactctgcatcggacaaaacggat
atgactccctcttctgcctctccgccgtcttataacagtgtggccaagtcagagaaagac
aaatatgaaaaagagaggagagagaaggaggacaaagcaaaagatgcaagggacagaaaa
aaatga
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integrated database retrieval system
