Ctenopharyngodon idella (grass carp): 127514397
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Entry
127514397 CDS
T08802
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127514397
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127514397
03041 Spliceosome [BR:
cide03041
]
127514397
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127514397
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
127514397
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
127514397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
RRM_3
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
127514397
NCBI-ProteinID:
XP_051753146
LinkDB
All DBs
Position
6:complement(6175167..6191031)
Genome browser
AA seq
1026 aa
AA seq
DB search
MIIENLDALKTWLSKTLEPICDADPSALAKYVVALVKKDKSEKELKALCIDQLDVFLQKE
TQTFVDKLFEAVNAKSYLPQPEQLTSTSRTESHQRTEKDESKREEQPSRDEDRDKKFSRR
INHSPPSSSRYSRDSRRIDDRKKDDRSRKREYDRNPPRRDSYRERYNRRRERSRTYSRSR
SRSWSKDRTRDRDRDRDRDRDRDRSRSRTRSRSRTRSRSRERDSVKSKYDHSRPERQEGP
TTDGYTATPLTPGSSSAHFPVPTLSSTITVIAPTHHGNNTTESWSEFPQDHTPFGRGGPP
RKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPSILPFQPPPLPGVDGPPPPGLPPP
HSLLTPPVNLRPPVPPPGTMPPSLPPVAGPPPPLPALQPSGMDAPPNSMTSSVPTIVTSG
IRPPITQPPPPLFTSDSFEPDVYNPEAPSMTSRPMYRHRVNAQRPNLIGLTMGEVDMPHR
EKMSNSNSARIVLESDSRKRGAALHDGAIPAKKPWFDKPNFNKPNHHGFHRKVPYSLINT
KLAIRQIPPELNNISKLNEHFSKFGTIVNLQVAYNNDPEGALIQFASPEEAKRAMQSTEA
VLNNRFIKVHWHREDTVEHMHTTPHPSVQSAQEPAVTTLKQSVKDRLGPLPTAHHEPSQD
PSFTPQNTTKASVKERLGFSKPAGFGGKVFSTSTGLTKTVYNPAALKAGQKGVPFGTSVS
TEDALKRKQEALKLQQDVRKKKQEILEKHIQTQKLLISKLEKNKSMKVEDKALIMQTLTT
LTNSITKLQEEIKGLSSSNALRTTLKSKAQAQKELLDTELDLYKKMQAGEDTAELKIKYT
QMQLEAAKRGLLTPGRGRGAHSRGRGAMRSRGRGIRGRGRGVPTHSVVDHRPTALEISGF
TEADRVDLLPHFAKFGEIEDCQMEDSSLSAIITYKSRAEAEQAAIHGIRLNNQELRLAWH
KPTTSLNTTDLDEAEPEDEELISRSKTAIGERAASALFPEDSLVDDSLLQDDDEEEDDNE
SRSWRR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaacctcgatgccttgaagacatggctctcaaagactcttgaacccata
tgtgatgctgacccttctgctcttgcgaaatatgtggttgccttggtgaagaaagacaaa
tccgagaaggagttgaaagcactatgcattgaccagttggatgtattcctccagaaagag
acacagacatttgtggataaactttttgaagctgtgaatgcaaagagttacctacctcaa
ccagagcagctaacttccacaagcagaactgaatctcaccagcgcacagagaaagatgaa
tcaaagagagaagagcagcccagccgagatgaagatcgagacaagaaattctcccggaga
ataaaccacagtcctccgtctagctccagatacagccgagacagcaggagaatagatgat
cgcaagaaagatgaccgctccaggaaacgagagtatgaccgtaacccacccagaagggac
tcgtacagagaacgctacaaccgcagaagagaacgcagccgcacttacagtcgaagtcgg
agtcgcagctggagtaaggaccgcactcgtgaccgagacagagatagagatcgcgacaga
gaccgggaccgcagcagatcgcgaactcgctcacgaagtcgcactaggagcagaagcaga
gagcgagattctgtaaagtcaaaatacgaccacagccgcccagaacgtcaggagggcccg
accacagatggctacaccgccacacctctcacccccgggagctcctctgctcatttccca
gtgcccaccctcagtagcaccatcactgtcatcgcccccacccaccatgggaacaacacc
actgagagctggtcagaattcccacaggaccacacgcccttcggcagaggaggcccacca
aggaaacgctgtcgtgactatgatgagaaaggcttctgtatgcgaggagacatgtgtcct
ttcgatcatggaagtgatccagtggtggtcgaggatgtcaatcttccgagcatactacct
ttccagccaccgcctcttcctggagtggatggcccaccaccaccgggtctgcctccccct
cactcactgctgactccaccagtgaacctcaggccacctgtgcccccaccgggcaccatg
cctcccagcctaccacctgtagcaggtcctcctcctcctcttcctgccctgcagccctct
ggtatggacgcccctccaaactccatgaccagctctgtgccgactatagtcacgtcaggg
attcggcctccaatcacccagcctccaccacccctgttcacttcggactcatttgagcca
gacgtgtataatcctgaagccccaagtatgacctcgcggcccatgtacagacacagagtc
aacgctcagcggcccaatctgattggtctgaccatgggtgaggtggatatgccccacaga
gagaaaatgtcgaacagcaacagcgctcggatagttttagaatcagactccaggaagaga
ggagcagcactgcatgatggagcgattcctgctaagaaaccctggtttgacaaaccaaac
ttcaacaaacccaaccaccacggctttcacagaaaagtgccctactctttaataaacacc
aaactggccatccgtcagattcctcctgaactcaacaacatcagcaaactaaacgagcac
ttcagcaagtttggcacaatcgtcaatctccaggtggcgtataataatgacccagagggg
gcactgattcaatttgcctcccctgaagaagccaagcgggccatgcagagcacagaggcg
gtactcaacaaccgattcatcaaagtacactggcacagagaggacacagtggaacacatg
cacaccacgccacatccgagcgttcagtctgcccaggagcctgcagttaccacactgaaa
cagtcagtgaaagaccggcttggacccctgcccacagcccaccatgaaccctcacaggac
cccagcttcactccacagaacacaaccaaggcttcagtgaaggagcgtctgggcttctct
aaaccagctggctttggaggaaaggtcttttctacatctactggcctgactaagactgtt
tataacccagctgcactgaaagctggccagaagggggtgccatttgggacaagtgtcagc
acagaagatgccctgaaaaggaaacaggaggcgctgaagcttcagcaggatgttaggaaa
aagaaacaggagattttggagaagcacattcagactcagaagctgctgatatctaagctg
gagaagaacaagtccatgaaggtggaggataaagctctgatcatgcaaaccctcaccacc
ctcaccaacagcatcaccaaactccaggaggagataaaaggactgtccagttcaaatgct
ctgaggaccacactcaagagcaaagcccaggctcagaaggagctcctggacacagagttg
gacctttataagaaaatgcaggcaggagaggacactgctgaactcaagatcaaatacact
caaatgcagttagaggctgccaaaagggggcttttgaccccaggacgtgggaggggggcc
cactccaggggtcggggggccatgaggagccgtggccgagggatccgagggcgcgggaga
ggagttccaactcactctgtggtggatcatcgacccacagctttagagatcagcggtttc
actgaggcagatcgagtcgacctgctgccgcactttgcaaaatttggggagattgaagat
tgccagatggaggattctagtcttagtgccatcattacgtacaaaagccgagcagaggct
gagcaggcggccatccatggcattcggttaaataatcaggagctgcgtttggcctggcac
aagcccacgacttccctcaacacaacagacctggatgaggctgaacctgaggatgaggag
ctaatttcaagatcaaagaccgcaataggagagagagcggcatcagcactgttcccagag
gattcgctcgtggacgattccctgctgcaggacgatgacgaagaggaagacgataacgag
tcgcgctcatggcgcagatga
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