Ctenopharyngodon idella (grass carp): 127515870
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Entry
127515870 CDS
T08802
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
cide04210
Apoptosis
cide04217
Necroptosis
cide04218
Cellular senescence
cide04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127515870
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127515870
04217 Necroptosis
127515870
04218 Cellular senescence
127515870
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127515870
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127515870
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
127515870
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127515870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
LPD26
Motif
Other DBs
NCBI-GeneID:
127515870
NCBI-ProteinID:
XP_051755960
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All DBs
Position
7:complement(29254650..29280489)
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AA seq
704 aa
AA seq
DB search
MEPIYATGMAAKLRSQWDRDAGLGQNHNALKFLGQDYESLRTQCQHTRTLFEDPLFPASS
SSLGFNELGPRSSKTQGLRWKRPKEICMRPQFIVDGATRTDICQGALGDCWLLAAIASLT
LNDNLLHRVVPHGQNFDGGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGEE
FWSALLEKAYAKLNGCYEALSGGSTSEGFEDFTGGVTEMYELKKAPADLFSIIGRAVERG
SLLGCSIDITSKFDMEAVTFKKLVKGHAYSVTGVEEVVYRGNMTKLVRIRNPWGEVEWTG
AWSDDSREWESVDRSVRGRLQNRSDDGEFWMSFSDFLREFTRLEICNLTPDALQANQVKK
WSTSLYQGEWRRGSTAGGCRNYPATFWINPQFKVALKHTDSPGQSDCSFLVALMQKDRRK
KRKEGQDMETIGFAIYEVPNEYVGKSAVHLKRDFFLTHGSSARSELFINTREVSSRFRLP
AGEYIIIPSTFEPNKEADFVLRVFSEKPANSVEMDDKVTANIPEEQHLDESQIDASFKSL
FRQLAGPDMEISVTELQTILNRIIGKHKDLKTDGFGKESCRSMINLMDTDGSGKLGLTEF
HVLWEKIKRYLQIFRDHDVDKSGTMSSYEMRKALEAAGFKLNNHLFQLIILRYTEEDLSV
DFDNFVTCLVRLETMFKTFNTLDTDADGVVSLTFFEWISLTMFA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatttacgccaccggaatggctgcaaagctccggagtcagtgggaccgggat
gcaggtttgggtcagaaccacaatgccttgaagttcctgggacaagattacgaatcactg
aggactcaatgccaacacaccaggaccctgtttgaagaccctttgttcccagccagcagt
tcttctctgggcttcaacgagttgggtccacgatcctccaagacgcaggggttgcgatgg
aagagaccgaaggagatttgcatgcgtccccagttcatcgtggatggagcgactcgtact
gacatctgtcagggagctctgggtgactgttggttgttggcggccatcgcgtctctgact
ctaaacgataacctcctgcaccgcgtggtgccgcacgggcagaactttgacggcggttac
gctggaatcttccacttccagttctggcagtttggtgagtgggtggacgtggtgattgac
gaccggttgcccgtgaaggatgggaagctgttgtttgtgcactcagcggagggtgaagag
ttctggagtgctctgctggagaaggcctacgccaagctgaacggctgttatgaggctctg
tcaggtggcagcacgtccgaggggtttgaggatttcaccggtggggtcacagagatgtat
gaattaaaaaaagcacctgctgaccttttcagcatcatcggccgtgccgtcgagagaggc
tcgctgctgggctgctctatagatatcaccagtaaatttgacatggaggcggtgaccttt
aagaagctagtcaaaggtcacgcgtactcagtgactggagtggaagaggtggtctacaga
ggaaacatgactaaactggtgcgtatcaggaacccatggggtgaagtggagtggacggga
gcctggagtgatgactctcgggaatgggagagtgtggaccgctctgtccggggcagatta
cagaaccgcagtgatgacggagagttctggatgtcgttcagtgatttcctgcgcgagttc
acccgcttggagatctgtaacctgacgccagatgctctccaggcgaatcaggtgaagaag
tggagcacgtcgctctatcagggcgagtggaggagaggcagtacagccggcggctgcagg
aactatccagccacattctggatcaaccctcagttcaaggtggccttaaaacatacagat
tctcccggccaatcagattgcagcttcctggtggcactgatgcagaaagaccgcaggaag
aagcgaaaagaaggacaggacatggagaccattggatttgccatttatgaggtgccaaat
gagtatgtaggtaagtcggccgtgcacctgaagcgggatttcttcctcactcacggatcc
agcgctcgctcggagctcttcatcaacacgcgggaggtgagctcacgcttccgtctgccg
gccggcgagtacatcatcataccctccaccttcgagccaaacaaagaggcagacttcgtg
ctcagagttttctcagagaaaccagccaactcagtagaaatggatgataaagtcacagct
aatattcctgaggagcaacatctggatgagagtcagattgatgccagctttaagagtctc
ttcagacagctggctggaccggacatggaaatcagtgtgacggagctgcagaccatcctg
aacagaatcatcggcaaacataaagatttaaagacagacggcttcggtaaggaatcctgt
cgcagtatgatcaacctcatggatacggacggcagcgggaagctcggactcacagagttc
cacgtgttgtgggaaaagattaaacgctacctgcaaatcttcagagaccatgacgtggat
aaatcaggcactatgagctcttatgagatgaggaaagccctggaagcagcaggttttaag
ttgaacaaccatttattccagctgatcatcctgcggtacacagaggaagacctctctgta
gatttcgacaactttgtcacctgtttagtgcgactggagaccatgttcaagaccttcaac
acgttggacacagacgcagatggagtcgtgtcgctcacattctttgagtggatctctctg
accatgtttgcctga
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