Ctenopharyngodon idella (grass carp): 127516977
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Entry
127516977 CDS
T08802
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127516977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127516977
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127516977
mRNA degradation factors
5'-3' decay
Lsm complex
127516977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
127516977
NCBI-ProteinID:
XP_051757917
LinkDB
All DBs
Position
8:7245104..7247114
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AA seq
133 aa
AA seq
DB search
MNYMPGTASLIEDIDKKHLVLLRDGRTLIGILRSIDQFANLVLHQTVERIHVGKKFGDIP
RGIFVVRGENVVLLGEVDLDKECDQILQRVSIEEILEEQRTEQQAKQESERLKLQAVKER
GLSIPKADTLDDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattacatgccagggactgcgagcctcatcgaggacattgataaaaaacaccttgtt
ctccttcgcgatggaagaacattgattgggatcctgagaagcatagatcagtttgccaat
ttagttttgcatcaaacagttgagcgaatccacgtaggaaaaaaatttggtgacatacct
cgtggaatatttgtcgtcagaggagaaaatgtcgtcttgcttggagaagtagatctggat
aaagaatgtgatcaaatcctccagagagtttccattgaggaaattctggaggaacagcgg
acagaacagcaagccaagcaggagtcagagagactgaagctacaggcagtgaaagagcga
ggtttatcaatccctaaagctgacacgttagatgatttctga
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