Ctenopharyngodon idella (grass carp): 127519025
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Entry
127519025 CDS
T08802
Name
(RefSeq) RANBP2-like and GRIP domain-containing protein 5/6 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
cide03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127519025
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
127519025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127519025
03110 Chaperones and folding catalysts [BR:
cide03110
]
127519025
04121 Ubiquitin system [BR:
cide04121
]
127519025
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127519025
Chaperones and folding catalysts [BR:
cide03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
127519025
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127519025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Pro_isomerase
Zn_ribbon_RanBP
WH1
TPR_14
TPR_1
TPR_2
TPR_7
TPR_CcmH_CycH
TPR_16
ANC1_spectrin
TLN1-like_RS
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
127519025
NCBI-ProteinID:
XP_051762359
LinkDB
All DBs
Position
9:complement(37545501..37581622)
Genome browser
AA seq
3027 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSASPSQKQKSGKGFLFAKLYFEAKEYELAKRHVSEYLTVQPKDP
KAHKFLGQLFERDGETDKAVGCYKRSVDLNPTQSDLVLKVAELLCGKPEPDSRAEFWVEK
AAKLLPGNPAVFNLREKLLSTRGQNGSNQLYELLQSELQLRPDDTYINHKLVRLYSADGR
HEEALKHCLVVEKTGLLRDRLEWYELLVSTLQEYLCQPSVASNEQASRKLHKELLLALCS
RVRLTLTVKSCEESADALWSLDRAMQSLKNTATNTLDGLSEVFTEMRAQLYLYAGTLLLK
MAQDGAQQWRAVQDLAALCYLVAYQAPRPKAKSLKSEHASHEPLELLASDRQSQAGHMLL
NLSQDVEQLLKDVVEAFGNRRAPSSLFDMLFGTQTHERLSFIYNDEMHVVGAHAPSAADL
AKWDSGAVLLHAGDLQHLAWLGLQWALMEQSVSLQHWLKQLFPRLTLETSKLDTNAPESI
CLLDLEVFLCGVVFSSQTQLQETARMASCSSPHQPRCLPLNIMKLLSSSKQREWWDAVYS
LIHKRAPPGTSAKLRLLVQHGLGTLRAGEKHGLQPALLIHWAQHLTDVSERVNSYYDQKE
YAGRSVHYWKVVLPLLEKIRSKRSIPEPLEPMFMHFRSKDIQPSQVRVYEEEAAISFATL
LDIEGNTDEAIAKLEKLNSILSNWHLAKIYQRLSEEMGNGLEETQGRCTNFLLQFRKYLT
KIYQASPEDMDKLPVSMEDVMDLLNEVNQQLADDGERDEDQVDYPLTSSPGQPTEPHVKF
STPSPSKSVTSPSKRSVFSPKTPPHWAEDHKSLLQMLCQQVESLKNEVHDLRHNSSDGTP
SSYRMYRDNYTAEGLQEAFPGAQAFHGVPLTVATTGPSVYYNQSPAYNSQYLLRTAANVT
PTKGPVYGMNRLPPQQHMYAYQQSTHTPPLQSTPACIYPQEQVFGAPIRFESPATSLLSP
YSEEYYGHNVPQPTVNPTLPEPGYFTKPCVVTPTQPSRSSESKPVDPKMSFGSQFTGEPP
KVPNFGGVAVAPSTSATTAFKFNSNFKSNDGDFTFSSAQMKNSESLLGLLTSDIPPKVEG
PSEPKHQTQDQPPSQSGVFTFGSKITTGFSFTDAAQSKMSVFGNTDQRFSFASGTKPVLG
NLEAREEKNGESDNDSTHVEEDEDGPHFEPIVPLPDKVDVKTGEEEEEEMFCKRAKLFRF
DSETKEWKERGIGSIKILKHRTSGKVRLLMRREQVLKICANHYITADMALKPNAGSDKSW
VWYAMDYADEMPKTEQLAIRFKTADEAALFKVKFEEAQKFLQESPQGQQLEKKCETPKPQ
VSSKEVDLKTLFSKKEGEWDCNVCCVRNAPTSVVCVACNSAAPSTAKDKPVESPLFQQLE
KKRETPKPQVSSKEVDLKTLFSKKEGEWDCNVCCVRNAPTSVVCVACNSAAPSTAKDKPV
EQLKGSVPAAPPAKLFSFGLSGDSEKNTVSTDVSSKGLAFGSQIPVSFQFGSNDATVTSV
GLAAQADKKTIQTDAPQPAKVSAAPSFSFGSGFGSQFAKKEGQWDCDSCFVRNDASATEC
VSCKAPCSTGLAAMFGKKAGQWDCDTCLVRNEGTSSHCVSCQAANPNMKGKTSTAQSSSS
FNFSFGSSSKQPAATGFTANFNPGPAFQFGTSKDKTSSESFKFESSTTQADKSSSSSNFS
FSMPVPAGGFKFGIVESEAKASDGQSQNGSASDLLKNIAELHREKEKESIPSSSDEPVDS
GSHDNNPLITGKPNTFSFADLAKSSQGSFQFGQKDIVELQREKEKDATPSSSDEPVDSGS
HDNNPLITGKPNTFSFADLAKSSQGSFQFAQEDPTFKGFAGAGAQLFTGINSSSKADTSV
DQDDEMYKTEENDDIQFEPVVQMPEKVDLVTGEEDEKILYSQRVKLFRFDTETSQWKERG
VGNLKLLKNNKNGRLRVLMRREQVLKVCANHWITTTMNLKPLSGSDRAWMWMANDFSEGD
AKLEQLAAKFKTPELAEEFKQKFEEFQRLLLDIPLQTPHKLVNTGRTAQLIQKAEEMKSG
LKDLKSFLTYQSKEDENSVAGNSTSTVIVKLDSENTSTALEWDNYDLQEEALKNYANSSL
CDASSQPDSVAKSLFRFGESSTGFSFSFQPILSPSKSPSKLNQSQASVGTDDEQEASQEE
ERDGQYFEPVVPLPDLIEVSTGEENEQVIFSHRAKLYRYDKELSQWKERGIGDLKILQNY
ETKRVRLVMRRDQVLKLCANHWIASNMKLEPMKGAEKAWIWSAFDFAEGQGKVEQLAVRF
KLQETASTFKEVFEEAKTAQEKDTLLTPLSARVPAFTQEALCGKAAVVVLEETTKERTGL
PEVESSPKQDGTPGAELGAQITKNVVSPPKFVFGSDSVQKIFGSPVSSKEKSPVMIPSPK
DEETSASRLKTSGQAVTSQPSIGTSFSIPTKSLDFRLFKNNPMAFWSCTSATQFEAQVSP
RSEQKSTEDVCDDDVEIIFERKPTREQAELAARLMLPPTFFCYKNDPGYVSDDDNDDEDF
ETAVRNLKGKLYPDGADGALDHDSECTLVWEKKPTAAEEQRARRLQLPPTFLCGVSSDSE
AEADRTDDFSSELQKLQLAQVKPKPSHDAAAEEPPADGSRPIDLSTKRSSETDSSSTAAG
LPFTFASASAFSFADLAKTSGEFAFGKKDANFSWSNAGATVFGSAPTRNEGEETHNEGEE
EGSDDESPRNEEIHFEPIVSLPEVEVKSGEEDEEILFKERTKLYRWDREINQWKERGVGD
IKILFHPVKKCYRVLMRREQVLKVCANHTISKSIELKPMNTSANALVWTATDYSEGDGKV
EQLAAKFKTPELAESFRRAFVDCQSLMSRADCAQMSMAEALSQDTNPVVYFDMGVDGEPA
GRIVMELFAHIVPKTAENFRALCTGEKGFGFHSSVFHRIIPDFMCQGGDITNGDGTGGKS
IYGGKFEDENFDVRHTGPGLLSMANRGRDTNSSQFFITLKKAEHLDFKHVAFGFVKDGMD
VVKRIAELGTKDGKPTKTITITDCGQL
NT seq
9084 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggagtaaagcagaagtggatcgatatgtttcttcagttcagagcgcctctccc
tctcagaaacagaagtcagggaaagggtttctgtttgccaaactatactttgaggctaaa
gaatatgaacttgctaaaaggcatgtttcggagtatttgaccgtacagccgaaggatcct
aaagcacacaagttcctcgggcagctgttcgagcgtgacggtgaaacggacaaagctgtg
ggatgttacaagcgttcggtggatctgaatccgactcagtcagacctggttctgaaggtg
gcggagctgctgtgtgggaaaccggagcctgacagccgggccgagttctgggtggagaaa
gctgccaagctcctgccgggaaatcccgccgtcttcaatctgagggagaagcttctgagc
acacgaggacagaatggctccaaccagctgtacgagctgcttcagtcggagctccagctg
cggcccgacgacacctacatcaaccacaagctggtgcgtctgtacagcgcagacggccgg
cacgaggaggcgctgaagcactgtctcgtggtggagaagactggccttctgagggaccgt
ctggagtggtacgagcttctggtcagcacccttcaggagtatctctgccagccgagcgtg
gcgtcgaacgagcaggcgtcgcgcaagcttcacaaagagctgctgctggcgctctgcagc
cgcgtcagactgacactgacggtgaagagctgtgaggagagcgctgatgctctctggagt
ttggaccgtgcgatgcagtctctgaagaacactgccacaaacacgctggacgggctgtcg
gaggtgttcacggagatgagggctcagctgtacctgtacgccgggacgctgctgctgaag
atggcgcaggacggggcgcagcagtggagggctgtgcaggatttagccgctctctgttat
cttgtggcctatcaggctccgagacccaaagccaagagtttgaaaagtgagcacgcgtcc
catgagcctttggagctgctggcctcggaccgccagagtcaggcgggtcacatgctgttg
aatctgagccaggacgtggagcagctgctgaaggacgtggtggaggcgtttgggaaccgg
agagcgccgagctctctgttcgacatgctcttcggcacacagacccacgagcggctctcc
ttcatctacaacgacgagatgcatgtggtcggcgcacacgcgcccagcgccgcagatctg
gccaagtgggacagcggtgcagtgctgctgcacgcgggcgatcttcagcacctggcgtgg
ctcggcctgcagtgggcgctgatggagcagagcgtcagcctgcagcactggctcaagcag
ctcttccctcgactcacgctcgagacctccaaactggacaccaacgcacccgagtccatc
tgcctgctcgacctggaggtgttcttgtgtggcgttgtgttcagcagtcagacgcagctg
caggagacggcgcggatggcctcgtgctcctcgccgcatcagccccggtgtttgcctctg
aacatcatgaagctcctgtcctcctccaagcagcgtgagtggtgggacgccgtctacagc
ctgatccacaagagagcgccgccggggacgtcggctaaactgcggctgctggttcagcac
ggtcttggcacgctgcgcgccggtgagaaacacggccttcagccggcgctgctcatccac
tgggctcaacatctcactgacgtgagtgaacgggtgaactcttactatgaccagaaggag
tatgcaggccgcagtgtgcactactggaaagttgtgcttcccttgcttgagaaaatccga
agcaaacgcagcattcctgaacctctggagccgatgttcatgcactttcgcagtaaagac
atacagccttctcaagtgcgagtatatgaggaagaggccgccataagctttgccacactg
cttgacatcgagggcaacaccgatgaggccatcgcaaagctggagaagctcaacagcatc
ttgtctaactggcatcttgcaaagatctatcagaggctgtcggaggagatgggaaacggg
ctggaggagacgcagggcaggtgcaccaacttcctcctgcagttcaggaaatacctgaca
aagatttatcaggccagtccagaggacatggacaagttacctgtatctatggaggatgtg
atggatttgctgaatgaggtcaaccagcagcttgcagatgatggcgagcgggatgaagat
caggtggactatccgctgacgtccagccccggtcagcccacagagccgcatgtgaaattc
tccactccgtccccatccaaaagtgtcacgtctccatccaaaagatccgtgttctcgccc
aaaacgcctcctcactgggccgaggaccataagtccctcttgcagatgttgtgccagcag
gtcgagtccttgaagaatgaggttcatgacctgcgccataattcctctgatggtacacca
tcctcatataggatgtatcgagataattatactgcagaaggacttcaggaagcatttcct
ggagcacaggcattccatggtgttcctcttaccgttgccactacaggtccctctgtgtac
tacaaccagtctccagcatataattcacagtatcttctacgcactgctgcaaatgttaca
ccaacaaagggcccagtatacgggatgaatcgtcttcctccacagcagcatatgtatgcc
taccaacaatcaacacacaccccacctcttcagtcaactcccgcatgcatatatcctcaa
gagcaggtctttggtgctcccatccggtttgagtcaccagctacatccttactctcccca
tacagtgaagagtattatggtcacaatgttcctcaacctacagtcaatccaacattgcca
gagcctgggtatttcactaagccatgtgtcgttacacccacgcagccatccaggagcagt
gaaagcaagcctgttgatcccaagatgagttttgggtcgcagttcacaggtgaacctcct
aaggttccaaactttgggggtgttgccgttgccccgtcaacatcagcaacaactgcattc
aagttcaactccaatttcaagtccaatgatggtgatttcaccttttcctctgctcagatg
aaaaatagtgaaagcctcttgggacttctgacatcagatattcctcccaaagtagaggga
ccatcagaaccgaaacatcagacccaagaccagccgcctagtcagagtggagtctttact
tttgggagtaaaattaccacaggattttcattcactgatgctgctcagagcaaaatgagt
gtttttggcaacactgaccaaagatttagctttgcaagtggaaccaaaccagtattggga
aatctagaggctcgggaagagaaaaatggggaaagtgataatgatagcacccatgtggag
gaggacgaggatggccctcattttgagcccattgtgcctcttcctgataaggttgatgtg
aaaactggtgaggaggaggaagaagaaatgttctgcaagagagcaaaactcttccggttt
gactctgagactaaagaatggaaagagagaggcattggaagtatcaaaattctaaaacac
aggacatctgggaaagttcgtctgttgatgaggagggaacaggttctcaaaatctgtgct
aatcactatatcactgcagatatggccctcaaaccaaatgctggatctgacaagtcctgg
gtgtggtatgcaatggactatgcagatgaaatgccgaagactgagcagttggccattcgt
tttaaaactgcggacgaggctgcactgtttaaagtcaaatttgaggaggctcaaaaattc
cttcaggagtccccacaaggccaacagttggaaaagaaatgtgaaactccaaagcctcag
gtttcctccaaagaagtggatcttaaaacactgttttccaagaaggagggtgaatgggac
tgcaatgtgtgctgtgtacgaaacgctcccacatctgtggtttgcgttgcctgcaacagt
gcagctccttccacagcaaaggacaaacctgtagagtccccactcttccaacagttggaa
aagaaacgtgaaactccaaagcctcaggtttcctccaaagaagtggatcttaaaacactg
ttttccaagaaggagggtgaatgggactgcaatgtgtgctgtgtacgaaatgcccccaca
tctgtggtatgcgttgcctgcaacagtgcagctccttctacagcaaaggacaaacctgta
gagcaactcaaaggctctgtgcctgcggctcctcctgccaaattgttttcttttggtctc
tctggagattctgaaaagaatactgtcagcactgatgtcagctcaaagggcttagcattt
gggtctcaaataccagtttcttttcaatttggatcaaatgatgctacagtaacatctgtt
ggccttgcagctcaggctgataagaaaactattcagactgatgcaccacaacctgcgaaa
gtgtcagcagctccatcattctcctttggctctggatttggctctcaatttgccaagaaa
gagggtcagtgggactgtgactcctgctttgtaaggaatgatgcttcagcaactgaatgt
gtttcttgcaaagccccctgcagcactgggttagctgccatgtttggtaaaaaggcagga
cagtgggattgtgacacttgcctggtaagaaatgaaggtacatctagccactgtgtctct
tgtcaggcagcaaacccaaatatgaaaggcaagacctctactgcacaatcaagttcctct
tttaacttcagttttggtagttctagcaagcaacctgctgcaacaggatttacagccaat
ttcaatccaggtcctgcttttcagtttggtacaagtaaggataaaacatcctcagaaagt
ttcaagtttgagtcctctacaactcaggctgataagtcatcaagcagttctaatttttca
ttctccatgccagtgcctgctggtggtttcaagtttggcattgtagaatctgaggcaaaa
gcatcagatggacagtcacaaaatggatctgcatctgacctcctcaaaaatattgccgag
cttcacagagagaaggaaaaagagtcaattccaagttcctcagatgagcctgtagactct
ggtagtcacgataacaatcccctcattaccggtaagcctaacacctttagttttgcagac
ttggcaaagtcctcacaaggtagttttcaatttggccagaaggatattgttgaacttcag
agagagaaggaaaaagatgcaaccccaagttcctcagatgagcctgtagactctggtagt
cacgataataatcccctcattaccggtaagcctaacacttttagttttgcagacttggca
aagtcctcacaaggtagttttcagttcgcacaggaggatcctacttttaaaggctttgca
ggggctggcgcacagctctttacaggaattaattccagctccaaagcagacacctctgtt
gatcaagatgatgaaatgtacaaaacagaggagaatgacgatattcagtttgagccagtt
gttcagatgcctgagaaggttgaccttgttacaggggaagaagatgagaaaatcttgtat
tcacagcgtgttaaactcttcagatttgatacagaaacaagccaatggaaagaaagagga
gttggcaaccttaaactgctcaaaaataataagaatgggagacttcgagttcttatgagg
agagagcaggtgttgaaggtatgtgctaatcattggatcacaaccacaatgaatttaaag
cccctttctgggtcagaccgagcctggatgtggatggccaatgacttttcagaaggagat
gccaaattagaacagcttgcggcaaaattcaaaacaccagagcttgcagaagagttcaag
caaaaattcgaggagtttcagcggctgctattggatattcctttacagacccctcacaag
cttgtgaatactggcagaacagcccaacttatacagaaagctgaagaaatgaaatctggt
cttaaagacctcaaatcattcttgacttaccaaagcaaggaggatgaaaatagtgttgca
gggaacagtacctctacagtcatagtcaagctcgactctgaaaacactagtactgcttta
gaatgggataattatgatttgcaagaggaagccctcaagaactatgctaattcctctctg
tgcgatgcctcttcacagcctgattcagtagcaaaaagtttgttccgttttggcgaatcg
tccacaggctttagtttcagttttcagcctattctcagtccctccaagtctccgtctaag
ttaaatcagagccaggcttctgttggcacagatgatgaacaagaagcatcgcaagaggaa
gagcgagatggtcagtactttgagcctgttgtgccattgcctgatcttatcgaggtctca
acgggggaagagaacgagcaagtcattttcagtcacagggccaaactataccgctatgat
aaagaacttagtcagtggaaggaacgaggtataggagaccttaaaatactacaaaactat
gaaacaaagcgtgtcagacttgttatgaggcgggaccaggtcctcaaactgtgtgcaaac
cattggattgcttcaaatatgaagcttgagcccatgaaaggagctgagaaagcatggatc
tggagtgccttcgattttgccgaagggcagggcaaggttgaacagttggctgtacgattc
aaacttcaggaaacggcaagtactttcaaagaggtcttcgaagaggcaaagactgcccag
gaaaaagacactcttctcaccccgctttccgcaagagtacctgctttcacccaagaggca
ctttgtggtaaggccgcagttgttgtactggaggaaaccacaaaagaacgtactggactt
cctgaggtcgaaagcagtcctaaacaggatgggacacctggggcagagcttggcgctcaa
atcaccaagaatgtggtctcccctcccaagtttgtctttgggtcagactctgtgcagaag
atctttgggagccctgtgtcatcaaaagagaaatctcctgttatgattcccagtccaaaa
gatgaggaaacgagtgcctcaagactgaaaacctctggacaggcagtgaccagtcagcca
tccattgggacttctttcagcattccaacaaaaagtttggattttaggcttttcaaaaat
aatccaatggcattttggagctgcacatcagccacccagtttgaagcccaagtttcgcct
cggtcagaacagaagagcactgaagacgtgtgcgatgatgatgttgagattatatttgag
cgaaagccaacaagagagcaagcagaactggccgctcgactgatgcttcctcctacgttc
ttctgttacaaaaatgacccaggatatgtcagcgatgatgacaatgatgatgaagatttt
gaaaccgcagtaagaaatctgaaaggaaagctgtatccggacggagccgatggggcattg
gatcatgactctgagtgcacactagtgtgggagaagaagccgactgcagccgaggagcag
agagcccgacgcctgcagctgccgcccaccttcctgtgcggcgtcagcagcgactccgag
gccgaggccgatcggacggacgacttcagctccgagctccagaaactacagctcgcacag
gtgaagccgaagccttcccatgatgctgcagcagaagagcctcccgcggacggcagccgg
cccattgacctctccacaaagaggagcagcgagaccgactccagctccaccgcagcaggt
cttccttttacatttgcatctgcgagtgcattctcatttgcagacttggcaaagacttca
ggagaatttgcttttggcaaaaaggatgctaatttttcatggtcaaacgccggagccaca
gtctttggaagtgcaccaacacgaaatgaaggagaggaaacgcacaatgaaggagaagag
gagggcagtgatgacgaatcgccccgtaatgaggagatccactttgagccgatcgtgtcc
ttgccagaggtggaggtgaagtctggtgaggaggacgaggagatcctgttcaaagaaagg
accaaactctaccgctgggaccgcgagatcaaccagtggaaggagcgtggcgtgggagac
atcaagatcctcttccaccccgtcaagaagtgctaccgtgtgctgatgaggcgcgagcag
gtgctgaaagtctgtgccaaccacaccatcagcaagagcattgagctcaagcccatgaac
acctcggccaacgcgctggtgtggaccgccaccgactactcagagggagacgggaaggtc
gagcagctcgcggccaagttcaagactccagagctggccgagtccttcagacgagcgttc
gtcgactgccagagcctcatgtcgcgggctgactgcgctcagatgtctatggccgaggcg
ctttcacaagacaccaaccctgtggtgtacttcgatatgggggtcgatggcgagcctgct
gggagaatcgtcatggagctgttcgctcacatcgttcccaaaacggcagagaacttccgg
gctctgtgcacgggcgagaagggcttcggtttccacagctccgtcttccacaggatcatc
cctgacttcatgtgtcagggcggcgatatcaccaacggggacgggactggaggaaaatcc
atctacggagggaagtttgaggacgagaactttgacgtgaggcacacgggcccgggcctg
ctgtccatggccaaccgcggcagagacaccaacagctcgcagttcttcatcaccctcaag
aaagcagagcacttggacttcaagcacgtggctttcggctttgtcaaagatggcatggat
gtggtgaagagaatagcagagctgggcactaaggacggtaaacccactaaaaccataacc
atcacagactgtggacagctctaa
DBGET
integrated database retrieval system
