Ctenopharyngodon idella (grass carp): 127520055
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Entry
127520055 CDS
T08802
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1b isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127520055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127520055
03012 Translation factors [BR:
cide03012
]
127520055
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127520055
Translation factors [BR:
cide03012
]
Eukaryotic type
Release factors
127520055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
127520055
NCBI-ProteinID:
XP_051763781
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All DBs
Position
10:33209346..33222238
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AA seq
442 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGLVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDTMRYVLRCHGENTTPENDEKILYLTPEQEKDKS
HFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRY
RVDFQGMEYQGDDDEFFDLDDY
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcagcggacaggaacgtggaaatttggaagattaagaagttg
atcaaaagccttgaggcggctagaggaaatggcaccagtatgatatccctcatcatccca
cccaaggatcagatctcgcgtgttgcgaagatgttggccgatgagtttggcactgcttcg
aacatcaagagcagagtcaacagactgtctgtgctgggagccattacctctgtgcagcag
agactcaaactctacaacaaagtgcctcctaatggcctggttgtgtattgtggcaccatt
gtgacagaggaaggcaaagagaagaaagtaaacattgattttgagccttttaaaccaatc
aacacatccttgtatttatgtgacaacaagttccatactgaggctctaacagctctgctg
tcagacgacagcaagtttggcttcattgtgattgatggtagtggtgccctgtttgggact
ttacaaggcaacacaagggaggtgctgcacaaatttactgtggaccttcccaaaaaacac
ggtagaggaggacagtccgctcttcgatttgcacgtttgagaatggagaagagacataac
tatgtgcgtaaagtagcggagacggctgtgcaacttttcgtgtccaatgacaaggtcaac
gtggcaggactggttctcgccggatcggccgactttaagacggagctcagccagtcagac
atgtttgatccaaggttacaagcaaaggttctgaagctggttgacatatcatatggagga
gagaacggtttcaaccaggccattgagctctcggcggaagttctgtccaatgtcaagttc
atccaagaaaagaaactaataggccgatattttgatgagatcagtcaggacacagggaag
tattgttttggagtggaagacacactcaaagcactggagatgggagcagtggagattctt
atagtttacgagaacctggacactatgcgttatgtcctacgttgtcatggagaaaatact
acacctgaaaacgatgaaaagatactctatctgacaccagaacaggagaaggacaagtct
catttcactgacaaagagacaggtcaggagcatgagctgatcgagagcatgccactgctt
gagtggttcgccaataactacaagaagtttggggccacgctggaaatcgttacagacaaa
agtcaggagggctcgcagtttgtgaaaggcttcggaggcatcggtggaatcttgaggtac
cgggtggatttccaaggcatggagtaccagggagatgatgatgagttctttgatttagat
gactactag
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