Ctenopharyngodon idella (grass carp): 127524775
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Entry
127524775 CDS
T08802
Name
(RefSeq) calpain 1, (mu/I) large subunit a isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04141
Protein processing in endoplasmic reticulum
cide04210
Apoptosis
cide04217
Necroptosis
cide04218
Cellular senescence
cide04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127524775
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127524775
04217 Necroptosis
127524775
04218 Cellular senescence
127524775
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127524775
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127524775
Enzymes [BR:
cide01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
127524775
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127524775
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127524775
NCBI-ProteinID:
XP_051772605
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Position
13:complement(4070350..4086972)
Genome browser
AA seq
704 aa
AA seq
DB search
MFTYGGISAQISANRLQAEGVGSFEQALHFQNQDFEALKQECLEGGYLFEDPCFPAEPPS
LGFKELAPYSSKTRDVEWMRPTELCDDPQFIVGGASRTDICQGALGDCWLLAAIGSLTLN
ERLLHRVVPHGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELQNAPRDLYRIISKALDRGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEFRGRTERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQFSRLEICNLSPDALSDDDLSHWN
TIKFHGAWRRGSTAGGCRNHPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RYRRHGQDMHTIGFAVYEIPEEYAGCQNVHLKKDFFLTHSSSARSETFINLREVSTRLRL
PPGEYIIVPSTYEPSKEADFVLRVFTEKQSETEEMDDEISADLEDEAEISEDDIDDSFKS
MFAQLAGEDMEISVRELRTILNRVVSKHKDLKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKIRKFLGIFREFDIDKSGTMSSYEMRIAVESAGFKLNNRLNQILVARYAENEVI
DFDNFVCCLIKLEAMFRSFQQLDKDGTGTAEMNLSEWLFMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatatggagggatctcagcacagatcagtgctaacaggctacaggcagaaggc
gtgggttcttttgagcaggctttacacttccagaaccaggattttgaggccctcaaacag
gagtgtttggaagggggctacctgtttgaagacccctgctttcctgctgaaccaccctct
ctcggcttcaaagaacttgccccgtattcctctaaaacccgtgatgtggagtggatgcgc
cctacagagctctgtgatgatcctcagttcattgtggggggagcttcacgaacagacata
tgtcagggagctctgggtgactgctggctcctcgctgctataggttcactgactctaaat
gaaagactcctccacagggttgtacctcatggccagagctttcaggacgactatgctgga
atattccactttcagttctggcagtttggcgagtgggtcgacattgtgattgatgatcga
ctcccggtcaaagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggttgaaaaagcctatgcaaaacttaatggatcctatgaagctctctctgga
ggctccaccactgagggttttgaggatttcactggaggggtctcagagatgtacgagctc
cagaatgctccaagagacctgtaccgaatcatcagcaaagccctggatagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggagtctgtaacgtttaagaag
ctggttaagggacacgcttactcagtgactgctctcaaacaggtggaatttaggggccgt
acggagaggcttatccgtatccgtaacccgtggggtcaggtagaatggacgggggcctgg
agtgataactcccctgaatgggacgagattgatccatctgagaaggatgacttgcactta
caaatggaggatggagagttctggatgtcattcagtgagtttttgcggcagttctccagg
ctggagatttgtaatctgtcccctgatgctctgagtgatgatgacctgagccactggaac
accatcaagtttcacggtgcctggcggaggggcagtaccgcaggaggctgccgaaatcat
cccaacacattttggatcaatcctcagtataagatcacgctgctggaggaagatgatgac
ccggaggatgaagaagtggcctgcagcttcctggtggctttaatgcagaaagaccgcaga
cggtaccgccgccacggacaggacatgcacaccatcggttttgcagtctacgagattcct
gaagagtatgcaggctgtcagaatgtgcatcttaaaaaggacttcttcctgacacactca
tcttccgctcgctctgagaccttcataaacctgcgggaggtgagcacccgtctccgcctc
cctcccggggaatacatcatcgtcccctccacctacgaacccagcaaagaggctgatttt
gtcctacgagtctttactgagaagcagtcagagacagaggagatggatgatgagatttca
gctgacctggaggatgaggcagaaatttcagaggatgacattgatgactctttcaagtcc
atgtttgcccagctggctggagaggatatggagatatctgtccgtgaactcaggactatt
ctcaacagagtagtgtccaaacacaaggatctaaagacagatggcttcagcatggagtcc
tgcagaactatggtcaacctcttggataaagatggtagtgcacgtttgggcttggtagag
tttcagatcctctggaacaaaataaggaagtttctggggatcttcagagagtttgatatt
gataagtcaggaacaatgagctcttatgagatgcgtattgctgtagaatcagcaggcttt
aagctcaataacagactcaaccagatccttgtagccagatatgctgaaaacgaggtcatc
gattttgataactttgtctgctgcttgatcaaactcgaggccatgttcagatcttttcag
cagttggacaaagatggaacaggaacggctgagatgaacttgtctgagtggctctttatg
accatgtgtggttga
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