Citrobacter sp. FDAARGOS_156: AL515_05280
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Entry
AL515_05280 CDS
T04313
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
cif
Citrobacter sp. FDAARGOS_156
Pathway
cif00540
Lipopolysaccharide biosynthesis
cif01100
Metabolic pathways
Module
cif_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
cif00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
AL515_05280 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cif01005
]
AL515_05280 (lpxC)
Enzymes [BR:
cif01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
AL515_05280 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
cif01005
]
Lipid A
AL515_05280 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
AMH13297
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All DBs
Position
1137250..1138167
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIVIEVNAPEIPIMDGSAAPFVYLLLDAGI
EELNSAKKFVRIKETVRVEDGDKWAEFKPFNGFTLDFTIDFNHPAIDSSTQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEYVTFQDDAELPLAFKAP
STVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggactcttaaacgtatcgttcaggcgactggcgtcggtttacatacc
ggcaaaaaagtcaccttgacattacgccctgcgccggccaacaccggggtcatctatcgt
cgcaccgacttgaatcctccggtagatttcccggccgatgccaaatctgtgcgtgatacc
atgctctgtacgtgtctggtcaacgagcatgatgtgcggatttcaaccgttgagcatctt
aatgctgctctggcgggcttaggtatcgataacatcgttattgaggttaatgccccggaa
atcccgatcatggatggtagtgctgctccgttcgtctacttgctgcttgatgcaggtatt
gaagaactgaacagtgcgaagaaatttgtccgcatcaaagagaccgttcgcgtcgaagat
ggcgacaagtgggctgagtttaagccgtttaatggttttacgttggatttcaccatcgac
tttaaccatccggcgatcgactccagcacccagcgctatgcgatgaacttctctgctgat
gcgttcatgcgtcagatcagccgtgcgcgtactttcggcttcatgcgtgatatcgaatat
ctgcagtcccgcggcctgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggcctgcgttttgaagatgaattcgttcgtcacaaaatg
ctcgacgcgatcggtgacttgttcatgtgtggtcacaacattattggtgcatttaccgcg
tataaatccggtcatgcattgaataacaaactgttgcaggcggtcctggcaaaacaggaa
gcctgggaatatgtgaccttccaggacgacgcagaactgccgctggcgttcaaagcgcct
tcgaccgtactggcataa
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