Citromicrobium sp. JL477: WG74_01150
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Entry
WG74_01150 CDS
T04089
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cij
Citromicrobium sp. JL477
Pathway
cij03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cij00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
WG74_01150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cij03021
]
WG74_01150
03400 DNA repair and recombination proteins [BR:
cij03400
]
WG74_01150
Enzymes [BR:
cij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
WG74_01150
Transcription machinery [BR:
cij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
WG74_01150
DNA repair and recombination proteins [BR:
cij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
WG74_01150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
ALG59624
LinkDB
All DBs
Position
complement(238200..242393)
Genome browser
AA seq
1397 aa
AA seq
DB search
MATKSANDDAKLPMKRGTAKTGTAKRRIRKIFGDIHEVVQMPNLIEVQRESYEQFLRSDK
EIDYVSGLEKTLRSVFPIRDFAGTAELDFVDYELEPPKYDTTECRQRGITYAAPMRVTLR
LIVFEVDQDTEARSVLDIKEQEVYMGDMPLMTENGTFIVNGTERVIVSQMHRSPGVLFDH
DRGKTHSSGKLLFAARVIPYRGSWLDFEFDAKDIVNVRIDRKRKLPVTSLLYGLGLDSEE
ILHHFYDTVVWQRAKDGWTIPFVAEQWRGAKPTFPLVDAKTGEEVFPANQKISPRAANKA
EKDGLETLLLPSEEIFSRYAARDMIDESTGRIYIEAGDEVTPEHLEVLDAAGVDQVELLD
IDEVNTGPWIRNTLKADKAENRDEGLEAIYKVMRPGEPPTKETAEALFEGLFFDSERYDL
SAVGRVKLNMRLELDAEDTVTTLRKEDILAVVKELVGLKDGKGEVDDIDNLGNRRVRSVG
ELLENQYRVGLLRMERAVKERMSSVDVSTVMPNDLINAKPAVAAVREFFGSSQLSQFMDQ
TNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLAS
FSRVNKYGFIETPYRKVVDGKVTSDVVYLSAMEEQKHTVAQASAELDENGSFVEELVSAR
QSGDNLMAPRETITLMDVSPKQLVSVGASLIPFLENDDANRALMGANMQRQAVPLVKAEA
PWVGTGMEETVARDSGAAITARRGGIVDQVDATRIVIRAIGDVEPGQSGVDIYTLQKFQR
SNQDTCINQRPLVKVGETVEQGDVIADGPSTDLGELALGKNSLVAFMPWNGYNYEDSILI
SERIVKDDVFTSIHIEEFEVMARDTKLGPEDITRDIPNVGEEALRNLDEAGIVYIGAEVH
PGDILCGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGVAGTVVEVRVFNRHG
IEIDDRTRAIQNEEIERLRKDSADERAILNRATYNRLKDMLVGQTASAAPKGIKKGTELT
DEVIESVDRHEWFKFAVEDDDRQAQLEAIKGQYDDAVKVIDAKFEDRKEKLERGDELAPG
VLKMVKVFVAVKRKLQPGDKMAGRHGNKGVISRILPEEDMPFLADGTPVDIVLNPLGVPS
RMNVGQIFETHLGMAARSFGHQIKDALEDWRAKNPDAEPGEPPAVIKDKLKEIYGEDYHD
SIDSRSGEEIAELAGNLTRGVPMGTPVFDGARESDVTTQLTKSGLDADGQSILFDGRTGD
AFHRKVTVGIIYMLKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALQ
AYGAAYTLQEMLTVKSDDVVGRQKVYEAIVKGDDTFEAGIPESFNVLVKEMRSLGLNVEL
KSIADEDDEDGMQIAAE
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagagcgcgaacgacgacgccaagcttccgatgaagcgcggcacggccaag
accggcactgccaagcgccgcatccgcaagatcttcggcgatattcacgaagtcgtgcag
atgcccaacctgatcgaggttcagcgcgaaagctacgaacagttcctgcgttccgacaag
gaaatcgactacgtttcgggcctcgagaagaccctgcgcagcgttttcccgatccgcgat
ttcgccggcacggccgagctcgacttcgtcgattacgaacttgaaccgcccaagtacgac
accaccgaatgccgccagcgcgggatcacctatgccgcgccgatgcgcgtcacgctgcgc
ctgatcgtgttcgaggtggaccaggacaccgaagcccgttccgtgctcgatatcaaggag
caggaagtctacatgggcgacatgccgctcatgaccgagaacggcaccttcatcgtcaac
ggcaccgagcgtgtgatcgtctcgcagatgcaccgttcgccgggcgtcctgttcgaccat
gaccgcggcaagacgcactcctcgggcaagctgctgtttgctgcgcgcgtcatcccctac
cgtggttcgtggctcgatttcgaattcgacgccaaggacatcgtcaacgtccggatcgac
cgcaagcgcaagctgccggtgacctcgctgctctacggcctgggcctcgacagcgaagag
atcctgcatcacttctacgacaccgtggtgtggcagcgcgccaaggacggctggacgatt
ccctttgtcgccgagcaatggcgcggtgccaagccgaccttcccgctggtcgacgccaag
acgggcgaggaagtcttccccgccaaccagaagatcagcccgcgtgccgccaacaaggcg
gaaaaggacggcctcgaaacgctcctcctgccgagcgaggaaatcttcagccgctacgcc
gcgcgcgacatgatcgatgaatcgaccggtcgcatctacatcgaagcgggcgacgaagtg
acgcccgagcacctcgaagtgctcgacgctgcgggcgtcgaccaggtcgaactgctcgac
atcgacgaggtcaacaccggcccgtggatccgcaacacgctgaaggccgacaaggccgag
aaccgcgacgagggcctggaagcgatctacaaggtcatgcgtccgggtgaaccgccgacc
aaggaaaccgccgaagcgctgttcgaaggcctgttcttcgatagcgagcgctacgacctg
tccgccgtcggccgcgtcaagctgaacatgcgtctggaactcgacgccgaagacaccgtg
accacgctgcgcaaggaagacatccttgccgtggtcaaggaactggtcggtctgaaggac
ggcaagggcgaagtcgacgacatcgacaacctcggcaaccgccgtgtgcgctcggtcggc
gaactgctcgaaaaccagtaccgcgtcggcctgctgcgcatggaacgcgcggtgaaggaa
cgcatgagctcggtcgacgtgtcgaccgtgatgccgaacgacctgatcaacgccaagccc
gccgtggcggcggtgcgcgagttcttcggctcatcgcagctctcgcagttcatggaccag
accaacccgctgtcggaagtcacccacaagcgccgcgtttcggcgcttgggccgggcggt
cttacccgtgagcgcgccggcttcgaagtccgcgacgtgcatccgacgcactatggccgc
atctgcccgattgagacgcccgaaggcccgaacatcggcctgatcaactcgctcgcctcg
ttcagccgcgtgaacaagtacggcttcatcgagaccccctaccgcaaggttgtggacggc
aaggtgaccagcgatgtcgtctacctgtcggcgatggaagagcagaagcacaccgtcgcg
caggcctcggcagaactcgacgagaacggcagcttcgtggaagagctcgtctccgcccgt
cagagcggcgacaacctgatggctccgcgtgaaaccatcacgctgatggacgtgagcccc
aagcagctcgtctcggtcggtgcatcgctcattccgttcctggaaaacgatgacgccaac
cgtgcgctgatgggtgccaacatgcagcgccaggcggtgccgctggtgaaggccgaggct
ccgtgggtcggcaccgggatggaagaaaccgtggcgcgtgacagcggcgcggcgatcacc
gcccgccgtggcggcatcgtcgaccaggtcgacgccacgcgtatcgtcatccgtgcgatc
ggcgatgtcgaacccggccagtcgggcgtcgacatctacacgctgcagaagttccagcgc
tccaaccaggacacctgcatcaaccagcgcccgctggtgaaggtgggtgaaacggtcgag
cagggcgacgtcatcgctgacggcccctcgaccgatctgggcgaactggcgctgggcaag
aacagcctcgtcgcgttcatgccgtggaacggctacaactacgaggatagtatcctcatc
tccgaacgcatcgtgaaggacgacgtgttcacctcgatccacatcgaggaattcgaggtg
atggcgcgcgataccaagctcgggccggaagacatcacccgcgacattcccaacgtgggc
gaggaagcgctgcgcaacctcgacgaggcgggcatcgtctacatcggggccgaagtgcac
ccgggcgatatcctgtgcggcaagatcacgcccaagggtgaaagcccgatgacgccggaa
gaaaagcttctgcgcgccatcttcggcgaaaaggccagcgacgtgcgcgacacctcgctg
cgcctgccgccgggcgttgccggcacggtcgtggaagttcgcgtgttcaaccgccacggg
atcgagatcgacgaccgtacccgcgcgatccagaacgaggaaatcgagcgtctgcgcaag
gatagcgccgacgaacgtgcgatcctcaaccgggcgacctacaaccgtctgaaggacatg
ctggtcggccagaccgcttcggccgcgcccaagggcatcaagaagggcaccgagctgacc
gacgaggtgatcgagagcgtcgaccgccacgaatggttcaagttcgctgtcgaagacgat
gaccgccaggcccagctcgaagcgatcaagggccagtacgacgacgccgtgaaggtgatc
gacgccaagttcgaggaccgtaaggaaaagctcgaacgcggcgacgaactcgccccgggc
gtgctcaagatggtcaaggtcttcgtcgcggttaagcgcaagctgcagccgggcgacaag
atggccggccgccacgggaacaagggtgtgatcagccgcatcctgccggaagaggacatg
ccgttcctcgccgacgggaccccggtcgacatcgtgctcaacccgctcggcgtgccctcg
cgcatgaacgtcggtcagatcttcgaaacgcacctcggcatggcggcccgcagcttcggg
caccagatcaaggatgcgctggaagactggcgtgccaagaaccccgatgccgaacccggt
gaaccgcctgcggtgatcaaggacaagctgaaggagatctacggcgaggactatcacgac
tcgatcgacagccgctcgggcgaggaaatcgcggagctggcgggcaacctgacccgcggc
gtgccgatgggcaccccggtgttcgacggtgcccgtgaaagcgacgtgaccacccagctg
accaagtcgggtctggatgcggacggccagtcgatcctgttcgacgggcgcacgggcgat
gccttccaccgcaaggtgaccgtgggcatcatctacatgctcaagctgcaccacctcgtc
gacgacaagatccacgcacgctcgatcggcccgtacagcctcgtcacccagcagccgctg
ggcggtaaggcgcagttcggcggacagcgcttcggtgaaatggaagtgtgggcgctgcag
gcatacggcgcggcctacaccttgcaggaaatgctcaccgtcaagtcggacgacgtggtc
ggccgccagaaggtctacgaagcgatcgtcaagggcgacgacaccttcgaagcgggcatt
ccggagagcttcaacgtgctcgtcaaggaaatgcgctcgctgggcctcaacgtcgaactc
aagtccatcgcggacgaggacgacgaagacggcatgcagatcgcggcggagtaa
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integrated database retrieval system
