Carya illinoinensis (pecan): 122279415
Help
Entry
122279415 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122279415 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122279415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cill03009
]
122279415
Ribosome biogenesis [BR:
cill03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
122279415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
Cnd1
HEAT_2
HEAT_GCN1_C
Motif
Other DBs
NCBI-GeneID:
122279415
NCBI-ProteinID:
XP_042946002
LinkDB
All DBs
Position
10:complement(1541385..1554132)
Genome browser
AA seq
883 aa
AA seq
DB search
MTRSSASSKKQQKRGVDFKKIKRKIGRKLPPPKNATNTEIKSKAIILPEQSVASEKQGLA
VNKKGLTLKELLQQTSHHNPKVRRDALLGIRDLFLKHPAELTLHKYAVIEKLRERISDDD
KMVRETLYQLFKSVIFPSCKQDNQGLFTSLIMAYIFNAMTHLSIDIRLMAFKFLDLAVEN
HSPSFLLYAEKILQSYGDILRKNQFYLHDKGKLKNVLAGLMRCLSLVPCNKREVDSCENN
DAGQGMLHAFEPDMPVESAGLPLIVEKLKDLVPILVNCFQDFISLVHTMPLLDVQSFDCL
VGILQSIDIAVRSFIYGTSKGKSEYELSHGESDVTVRDEAISSLLMKKVLVLFPLSPAHQ
LSEKDVDRYFIFNVLITGILLQFSEWICPPADVLEKFLEFIENALLGKICSGTRFGKAVW
EKHLLSLLPFFPKLLLQVVSNWRSRLLQAFTKTFRDCHPESSLKLACLSTIEDMLIPKED
GPCLDASDPEILDHQIAWIRELSPLLILLGDKNPYCSQVVLRLQLRLGQCALVNSSFAWE
YENMQYSLLEFYSTCRDDGDIYYGPFIRLPKDSQELSLCSLYYFCNLDSPLLRSIASCCL
CPDLEPFILFRIVEVLHSAYTAGHIKITDHISFFITLLSRFKVFPENIYPVIQSDTEIGN
RGTYKSVTSVVCSNLSQMGDTSLVFQMVEKVILGQMLLKPSLDNACAMLRMLAILDSKPT
RLSEQSINTLSNFLSGYLIDVVHCIPEDHDEPNVSIPILRYYLLPCFFLFDRSHKLLDLV
LRMMGSLITESSSPLFSPDYIRYATDSSSRTNAIVSVIVLMHRDVKVHKILSELKAETRN
LLQKMLSLQSSEEINMTIEERHKIRRAFDKLKALTSANGLPAS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgttcctcagcttcatcaaagaaacagcaaaagcggggagtcgactttaaaaaa
ataaagcgtaagattggccggaaactgcccccaccgaagaatgctacgaatactgaaatt
aaatccaaagcaattattcttcctgagcagagcgtagcatcagaaaagcaaggtttagct
gtgaacaagaaaggtttgactttgaaagaacttcttcagcaaacatcccaccacaatccg
aaagttcgtagagatgcattgcttggtattagggatttattccttaaacacccagcagag
ctaacgttgcataaatatgctgtcatagaaaaattgcgtgaacgtatcagtgatgatgac
aaaatggttcgagaaacactgtatcaactttttaagtcagtaatatttccaagctgtaaa
caggacaatcaagggcttttcacttccttaatcatggcatatatatttaatgcaatgacg
catttatcaattgacattcggctcatggcattcaaatttcttgaccttgctgttgaaaat
cattccccatcctttttgttgtatgctgaaaagattcttcaaagttatggggatattcta
cggaagaatcagttctatttacatgacaagggcaagctcaagaatgttcttgctgggttg
atgcgctgcttgtcactggtgccatgtaataaaagagaagttgactcatgtgaaaataac
gatgctggacaagggatgttacatgcttttgaacctgacatgcctgtagaatctgctggg
cttcccctcatcgtcgagaaactaaaggatctcgtgccaattttagttaattgtttccaa
gatttcatttcactggttcatactatgccacttcttgatgtgcaatcatttgattgtctt
gtgggtatacttcagagcatagatattgcagtcagatcttttatttatgggactagtaag
ggtaagtccgaatacgaactttctcatggagaatcggatgtgacagtgcgggatgaagct
atctcatcattgttaatgaagaaggtactagtactgttccccctcagtccagcacatcag
ctttcagaaaaggatgtggatagatattttatcttcaatgttttgattacgggaatactt
ttgcaattcagcgaatggatatgccctcctgctgatgtattggaaaaatttctagaattt
atagaaaatgcgctgcttggaaagatttgtagtgggacacgctttggcaaagcagtatgg
gaaaagcatttactttcccttcttcctttctttccgaaacttcttttacaagtggtgagc
aattggaggtctcgtcttcttcaggcgtttactaaaactttcagggattgccatcccgag
tcttcattaaaactggcatgcctttctacaattgaagacatgcttattcctaaagaagat
gggccgtgccttgatgctagtgatccagaaatattagaccatcaaattgcttggataaga
gagctttctccattgctaatcctgctaggtgataaaaatccttattgttcccaggttgtc
ttgcgtctgcaacttcgcctgggccagtgtgctctggtaaactcttcctttgcatgggaa
tacgaaaacatgcaatactcattgctagagttttacagcacatgcagagatgacggagat
atatactatggccctttcataaggcttcctaaagattctcaagaactctcactctgttcc
ctctactatttctgtaatttggattcacctttgttgaggtcaatagcttcatgttgtctg
tgtcctgatttggaaccatttatattatttcgaattgtagaggttctgcattcggcatat
actgctggacatatcaaaattactgaccatatcagtttcttcatcactttgctctcacgt
ttcaaagtttttcccgaaaacatatatcctgttatacagagtgacacagagattggaaac
cgtggaacatataagtcagtcactagtgttgtttgctcaaacctatcgcagatgggtgat
acttctcttgtttttcagatggtagagaaagtaatacttggacagatgttgctgaagcca
tctctagacaatgcatgtgctatgctcagaatgcttgctatactggattccaaacccaca
agactttctgagcagagtattaacacactaagcaatttcctttcgggatacctcattgat
gttgtgcattgcattccagaagatcatgacgagcccaatgtctccattcctattctccgt
tattacctcctcccttgtttcttcttgtttgatagaagtcacaaacttctggatctcgtg
ttgaggatgatggggtcactgataactgaaagtagttcaccgcttttttcgcctgactat
atccgatatgcaacagacagttcaagtagaacaaatgccattgtttctgtcattgttttg
atgcacagggatgttaaagttcataaaattctctctgaactgaaggcagaaactcgcaat
ttattacaaaaaatgctctctttgcagtcttcagaggaaatcaacatgacaatagaagaa
aggcacaaaatacggcgagccttcgataaactaaaagctctgacatcagccaatggtctg
cctgcatcgtag
DBGET
integrated database retrieval system
