Carya illinoinensis (pecan): 122281409
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Entry
122281409 CDS
T08745
Name
(RefSeq) DNA-directed RNA polymerases I and III subunit RPAC1
KO
K03027
DNA-directed RNA polymerases I and III subunit RPAC1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122281409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122281409
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122281409
RNA polymerase I system
RNA polymerase I
122281409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Fer4_7
Motif
Other DBs
NCBI-GeneID:
122281409
NCBI-ProteinID:
XP_042948794
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All DBs
Position
11:complement(44757982..44762840)
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AA seq
405 aa
AA seq
DB search
MAKRDERMSEEEEESEAESMSESESGGRGESRGGLDYIMSLPDVPMKLPPHVELQRTRVF
CNTDAPNHTDTIQYSGAFASVGIDNSFRLDHFRKDFRVEVIRCSDDDMEFDMIGIDPAIA
NAFRRILIAEVPTMAIEKVLIANNTSVVQDEVLAHRLGLIPISVDPRLFEYAENNALNER
NSIVFKLHVRCERGGPRLTVKANALTWLPNGSEFPLQSEDPNSNSTSKPKTYTSFSCSQD
SLPEFSSNPIGFKGRLNDIIISKLAPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPE
VVLLEEIEDELAENLKSKCPVGVFDIEDIGNGKKRLNVARPRACTLCRECIREGEEWEKR
VSLRRVKDHFIFTIESTGALPPEVLFTEAVKILESKCERVISELS
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcgagatgaacggatgtccgaagaagaggaagaaagtgaagcagagtcgatg
tctgagtctgaatcaggaggaagaggagaatcacgaggaggactagattacataatgagt
cttccagacgttcctatgaaacttccaccgcacgtggagctacagagaacccgcgtcttc
tgcaacactgacgctcccaaccatacagatactatacagtattctggtgcttttgcgtcc
gtgggaatagataatagtttccgactagaccattttcgcaaggactttagagttgaagtg
attagatgctcggatgatgacatggagtttgatatgattgggatcgatccagcaattgcc
aacgcatttcggagaatcctcattgctgaggttccaacgatggccattgaaaaagttctt
attgcaaacaatacgtcagtagtccaagatgaagtgcttgcccacaggttgggtcttatt
ccgatcagtgttgacccgaggctttttgaatatgcagaaaataatgcactgaacgaaagg
aattccattgtttttaaacttcatgttcgttgtgaacggggtgggccgcgtcttacagta
aaagcaaatgcattgacgtggttacccaatgggagtgagtttcctttgcaatcagaagac
ccaaattcaaattccacctcaaaaccaaaaacctacacttcatttagctgtagccaagac
tctctgccagaattttccagcaatccaattggcttcaagggaagacttaatgatattatt
atttcgaaacttgcccctggtcaggaaattgaacttgaagcacatgctgttaaaggcatt
ggtaaaacacatgcaaagtggtcaccagtggccactgcttggtataggatgcttcctgag
gttgtactgctggaagagattgaagatgaattggctgaaaatcttaaaagtaaatgccca
gttggagtattcgacattgaagatattggcaatggtaaaaaaaggttaaatgtggcccga
ccgcgagcttgcacattgtgtagagaatgcatcagagaaggggaagaatgggagaagcgt
gtttcgttacgacgtgttaaggatcatttcatattcacgattgaatcaactggagcatta
cctcctgaggtactatttaccgaagctgtgaagattttggaaagcaagtgtgaacgtgtg
atttctgagctctcttga
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