Carya illinoinensis (pecan): 122281796
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Entry
122281796 CDS
T08745
Name
(RefSeq) chaperone protein ClpC, chloroplastic-like
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
cill03110
]
122281796
Chaperones and folding catalysts [BR:
cill03110
]
Heat shock proteins
HSP100
122281796
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_16
Sigma54_activat
UVR
AAA_22
nSTAND3
TniB
AAA_14
NACHT
AAA_28
NBD_SMAX1
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
MazE_antitoxin
Motif
Other DBs
NCBI-GeneID:
122281796
NCBI-ProteinID:
XP_042949518
LinkDB
All DBs
Position
11:402429..412051
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AA seq
924 aa
AA seq
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MASFLVQSANIPALVASQRSSQSKGPGNGKAKRSVRMMSSLQAPGLRMGSFSGLRSFNYL
DTLVGLRLDFNSRVATTINSPQGRGSRCVAKAMFERFTEKAIKVIMLAQEEARRLGHNFV
GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRVL
ELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGESTEA
VGAGVGGGSSGNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVTQILGRRTKNNPCL
IGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME
EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTIDEYRKHIEK
DPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTEEALVSAAQLSYQYISDRF
LPDKAIDLIDEAGSRVRLRHAQLPEEAREIEKELRQITKEKNEAVRSQDFEKAGELRDRE
MDLKAQISALVDKGKEMTKAESEAGDVGPVVTEVDIQHIVSSWTGIPVEKVSTDESDRLL
KMEETLHKRVVGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVNFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFDRLKGK
DIELQVTERFRDRVVEEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD
SDGNVIVLNGSGGAPEPLGEALTV
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggctagctttttggtgcagtcagcaaatatccctgctttagttgcaagccagaggtct
agccaaagtaaaggacctggaaatggaaaagcaaaaaggagtgttagaatgatgtctagt
ttacaagcaccgggattgcgaatgggaagcttctctggattgcgaagttttaattattta
gatactcttgttggactgaggctagattttaattctagggtggcaactacaatcaattcc
ccgcaaggaaggggcagcagatgtgtagctaaagcaatgtttgagcgctttacagaaaag
gcaattaaagtaattatgcttgcacaagaggaagcaagacggcttggtcataattttgtt
ggcacggagcagatcttgttgggtcttattggtgaaggaacaggcattgctgctaaggtt
cttaaatctatgggaatcaatcttaaagatgcacgagtagaagtggaaaagataattgga
aggggtagtggatttgtcgctgtggagattccattcactcctcgagcaaagcgtgtgttg
gaactctcgctggaggaagcccgccaacttggccataactatattggatctgagcacttg
cttctgggactgcttcgtgagggtgagggtgtagcggctcgtgttcttgagaacttaggt
gctgacccaagcaacatccgcacccaggttattcgaatggttggtgagagcactgaagct
gttggtgctggtgttggtggaggaagcagtggcaataagatgccaacactggaggaatac
ggaaccaatctgactaagctagcagaggagggtaaattggatcctgttgttggaaggcag
ccgcaaatagaacgtgttacccaaatattgggccggcgaaccaaaaacaatccctgtctt
attggagaacctggagttgggaaaactgcaatcgcagaagggcttgctcaaaggattgca
actggtgatgttcctgaaacaatagaggggaagaaggtcataaccttggatatgggtctt
cttgttgccggcacaaaatatcgtggagagtttgaggaaagattaaagaagctcatggag
gaaattaaacaaagtgatgagataatactcttcatagatgaggtgcacactttaattgga
gcaggagcagcagaaggagcaattgatgcggcaaacatattgaaaccggctctagcaaga
ggtgaactacagtgtattggagccacaacaatagatgaatatagaaagcatattgagaag
gacccagcattggaaagaagatttcagccagtcaaagtacctgaaccaacagtggatgaa
accatacagattttaaaggggcttcgggagcgatatgagattcatcataagctccgctac
acagaagaagctcttgtttctgctgcacagctttcataccagtacatcagtgaccgtttt
ctgcctgacaaggctattgacttgattgatgaagctggttctcgggttcgtctacgtcat
gcacagctaccagaagaagcaagagagattgagaaggaactcagacagatcacaaaggag
aagaatgaagccgttcgcagccaagactttgagaaggctggtgagttacgggatagagaa
atggatcttaaggcacaaatatcagctcttgtagacaaaggtaaggaaatgactaaggca
gagagtgaggctggagatgtaggtcctgttgtgaccgaggtggatattcaacatattgtt
tcctcttggaccggcattcctgtggagaaagtttctacagatgaatctgaccgcctcctc
aagatggaagagaccctccataaacgggtcgttggtcaggatgaagcagtcaaagccatc
agccgagctattcgccgagcccgtgttggactcaagaatcccaaccgtccaattgccagc
ttcatcttttcaggcccaactggtgtagggaagtctgaacttgcaaaagcattggctgct
tactactttggctctgaagaagccatgattaggcttgatatgagtgaatttatggaaaga
cacactgtctcaaagctaattggctcaccccctggttatgttggttacacagaggggggt
cagctgactgaggctgttcgacgccgtccttacaccgtggtactcttcgatgagattgag
aaggcccatcccgatgtattcaacatgatgcttcaaattcttgaggatggaagattgaca
gatagcaagggcagaactgtgaacttcaagaatactcttctgataatgacatcaaatgtg
ggaagcagtgtcattgagaaaggaggccgccggataggatttgatctggattatgatgag
aaagatagcagttataatcgaattaagagcttggtgacggaggaactgaaacaatatttc
aggcctgaatttttaaacagattggatgagatgatcgtctttaggcagctcacaaagctg
gaggtaaaggagatagccgatattatgctgaaagaggtttttgataggctgaagggtaaa
gatatagagcttcaagtgacagagaggttcagagatagagtggttgaggaagggtataac
ccaagctatggggcaaggcctctgaggagagccataatgagacttctggaggacagcatg
gcagagaagatgcttgcgagggagatcaaagagggtgattcagttattgtggatgttgac
tctgatggcaatgtgatagtgctcaatggtagtggtggtgctcctgagccattaggagag
gctcttaccgtgtaa
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