KEGG   Carya illinoinensis (pecan): 122295200
Entry
122295200         CDS       T08745                                 
Name
(RefSeq) splicing factor 3B subunit 6-like protein
  KO
K12833  pre-mRNA branch site protein p14
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122295200
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122295200
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122295200
 Complex B
    122295200
 Complex C
   U2 SnRNP specific factors
    122295200
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_7 RRM_10 DUF1177
Other DBs
NCBI-GeneID: 122295200
NCBI-ProteinID: XP_042960250
LinkDB
Position
14:28795694..28796356
AA seq 123 aa
MATISLRKANTRLPPEVNRVLYVRNLPFNISSEEMYDIFGKYGAIRQIRVGTSKDTRGTA
FVVYEDIYDAKTAVDHLSGFNVANRYLIVLYYQQAKMSKKFDHKKKEEEITKLQEKYGLS
KDK
NT seq 372 nt   +upstreamnt  +downstreamnt
atggccactatcagcctgcggaaggcgaacacgcggctgccgccggaggtgaaccgcgtg
ctgtacgtgcggaacctgcctttcaacatatcgagcgaggagatgtatgacatcttcggg
aagtacggggcgatacggcagataagggtggggacgagtaaggacacacgcggcacggcc
ttcgtggtctacgaggacatctatgatgccaagaccgccgtggaccacctctccggcttc
aacgtcgccaaccggtacctcatcgtgctctactaccagcaggccaagatgagcaagaag
ttcgaccacaagaagaaggaggaagagatcaccaagctccaggagaagtacggtctctcc
aaagataagtag

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