KEGG   Carya illinoinensis (pecan): 122300604
Entry
122300604         CDS       T08745                                 
Name
(RefSeq) DNA-directed RNA polymerases II and V subunit 8A-like
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03020  RNA polymerase
cill03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    122300604
  09124 Replication and repair
   03420 Nucleotide excision repair
    122300604
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cill03021]
    122300604
   03400 DNA repair and recombination proteins [BR:cill03400]
    122300604
Transcription machinery [BR:cill03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     122300604
  RNA polymerase III system
   RNA polymerase III
     122300604
  RNA polymerase I system
   RNA polymerase I
     122300604
DNA repair and recombination proteins [BR:cill03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      122300604
SSDB
Motif
Pfam: RNA_pol_Rpb8
Other DBs
NCBI-GeneID: 122300604
NCBI-ProteinID: XP_042967311
LinkDB
Position
2:complement(27040880..27044719)
AA seq 145 aa
MVEFLFEDIFRVERINPDGKKFDKVIRVEAKSEKFDMFMHLDVMVTKEFILKEGDKFAMV
LAPTLNLDGTPDTGYYTPGNRQSLADRFDYVMYGKLYRIADGSGRGTKAEMNISFGGLLM
MLKGDPSHCNKFELDQRLYILMRKV
NT seq 438 nt   +upstreamnt  +downstreamnt
atggttgagtttctttttgaagatatttttagggttgagcgtattaacccagatggtaaa
aagtttgataaagttatccgggtggaagcaaaaagtgagaagttcgacatgttcatgcat
ctagatgtgatggttacaaaggaatttatactgaaggaaggtgataagtttgcaatggta
ctagctccaacactaaatctggatggaacacctgatactggctattatactccgggcaat
cggcagtcacttgcagacagatttgattatgtaatgtatgggaagctttatagaattgct
gacggttcaggacgtggaacaaaagcggagatgaacatttcatttggtgggcttctgatg
atgctgaagggagatccatctcattgcaacaagtttgaacttgatcagaggctatatatc
ctcatgaggaaggtgtaa

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