Carya illinoinensis (pecan): 122300978
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Entry
122300978 CDS
T08745
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122300978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122300978
03012 Translation factors [BR:
cill03012
]
122300978
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
122300978
Translation factors [BR:
cill03012
]
Eukaryotic type
Release factors
122300978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
122300978
NCBI-ProteinID:
XP_042967955
LinkDB
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Position
2:32039978..32043720
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AA seq
437 aa
AA seq
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MADGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTFDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFDEISQDTG
KYVFGVEDTLKALEMGAVETLIVWENLDINRYVLKHSTTGEIIIKHLNKEQEADQSNFRD
PATSADLEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDELSDDGEVYEDSD
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcatgaaacggataagaatatcgagatatggaaaatcaagaagttgatc
aaagccctggaatctgcaagaggaaatggtaccagcatgatatctcttataatgcctcca
cgtgatcaaatatctcgtgtgactaagatgttgggtgatgaatttggaactgcttcaaac
atcaaaagcagagtcaaccgtcagtcggttttggccgccattacttctgctcaacagagg
ctgaagctgtataataaggttcctcccaatgggcttgtcctttatactggaacaattgtt
actgaggatgggaaggaaaagaaggtcacgtttgacttcgagccttttaagcctataaat
gcatcactctacctctgtgataataagtttcacacagaagccctaaatgaactcttagag
tctgatgacaagtttggttttattgtcatggatggaaatggcacactttttgggacattg
agtggaaacacacgagaggttcttcataaattcacagttgatctaccaaagaagcatgga
agaggagggcagtcagctctgcggtttgctcgtcttcggatggaaaagaggcacaactat
gtgagaaaaactgcagaacttgccacacaattcttcattaatcctgcaacgagtcagcct
aatgtttctgggctaatacttgcaggttctgccgacttcaaaactgagctgagtcagtca
gatatgtttgatcctcgattgcaggcaaagatattgaatgtggttgatgtttcttatgga
ggcgaaaatggtttcaatcaagctattgagctgtcatcagaaatcctgtcaaatgtgaag
tttatacaagagaaacgccttattgggaaatattttgacgagatcagccaggatactggg
aaatatgtctttggcgtagaggacacattgaaagctctagaaatgggtgctgtagaaaca
cttattgtttgggaaaatttggacattaataggtatgtcctgaaacacagcaccactggt
gagataataataaagcacctgaacaaggaacaagaggctgatcagagcaactttcgggat
ccagctacctctgcggatttggaagttcaggagaagatgtccttacttgagtggttcgcc
aatgagtataagcggtttggctgcacacttgaatttgttaccaacaaatctcaagaggga
tcacaattttgcagagggtttggtgggatcgggggtatacttcgttaccagcttgatatg
agatcctttgatgagttatctgatgatggagaagtatacgaggattcggattaa
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