Carya illinoinensis (pecan): 122307459
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Entry
122307459 CDS
T08745
Name
(RefSeq) ATP-dependent DNA helicase DDM1 isoform X1
KO
K19001
ATP-dependent DNA helicase
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cill03036
]
122307459
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122307459
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
Motif
Other DBs
NCBI-GeneID:
122307459
NCBI-ProteinID:
XP_042976290
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Position
1:5417125..5438580
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AA seq
757 aa
AA seq
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MDTKNEMNGEGSAGSPTSVLEDEDICKVKMEVKSEEEMCPHEGNGDSSLILRAMAKEEEK
LLEARVKEEDEEQRKEPEGEPQLNDSQFTKLDELLTQTQMYSEFLLEKMDDITTNGMEQE
NVVVEKKRGRGSKRKAAAQYNNKKAKRAVAAMLTRSHEAKQAEDVNLTEEERVEKEQQEL
VPLLTGGKLKQYQIKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLAHLKGKGLDGPY
LVIAPLSTLSNWVNEIARFVPSMNAVIYHGDKNQRDEIRRKHMTKAIGHEFPIIVTSYEV
AMNDARRCLRHYNWKYVVIDEGHRLKNAKCKLLKELKYLPVENKLLLTGTPLQNNLAELW
SLLNFLLPDIFSSHNEFESWFDLSGKCNNEAMREEVEEKRRAQVVAKLHAILRPFLLRRM
KADVEQLLPRKKEIILYATMTDHQKDFQDHLINRTLENHLIEKANSGRGMKGKLNNLMIQ
LRKNCNHPDLLESAFDGSYFYPPVEEIIGQCGKFRLLDRLLERLLAHKHKVLIFSQWTKV
LDIIDYYFSEKGHEVCRIDGSVKLDERKRQISDFNDSNSNYRIFLLSTRAGGLGINLTAA
DTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLATAQSVEGRVLKRAFSKLKLEHVV
IGKGQFHQERKSSSTDVFEQEDLLALLREEETAEDKMIQTDISNEDLERVLDRSDLVVDA
LNNDEKSNGGGVFPLKGPGWEVVIPTATGGMLSTLNS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaagaacgaaatgaatggcgaaggctctgcagggtcgccgacttcggtgctt
gaagacgaggatatctgcaaggtgaaaatggaagtcaagtcagaggaagaaatgtgtcca
catgaaggaaatggagattcctctttgatattgagagcaatggccaaggaggaagaaaaa
ctattggaagctcgggttaaggaagaagatgaagagcagagaaaggagccagagggggaa
ccccagttgaatgacagtcaatttaccaaattggatgagcttctaactcaaactcagatg
tactctgagtttttgctggaaaaaatggatgatattacaactaatggaatggagcaagag
aatgtagttgttgaaaaaaagagaggtcgtggatcgaaaagaaaagctgctgcacaatac
aataataagaaggccaagagggctgttgcagccatgcttacaagatctcatgaagccaag
caagctgaagatgtgaaccttactgaggaagaaagagttgagaaagaacagcaagaactt
gtgcccttgttaactggcggaaaattgaagcagtatcagatcaagggagtgaagtggttg
atatcgttatggcaaaatgggctgaacgggatccttgcagatcaaatggggcttggaaag
acaattcaaaccattggctttcttgcacatttaaaaggaaagggattggatggaccgtat
ttagtaattgctcctctttctactctctcaaattgggtgaatgagattgcaaggtttgtg
ccctcaatgaatgctgttatctaccatggcgacaagaaccagagggatgagatacgaagg
aagcacatgactaaagcaattggccatgaatttcctataatcgtgacttcgtatgaggtg
gccatgaatgatgcaagaagatgtttgaggcattataattggaaatatgttgtaattgat
gaggggcacaggttaaaaaatgcaaaatgcaaacttctgaaggaattaaaatacttacct
gtagaaaataagcttctgttaactgggacacctctacagaataatctggcagagctttgg
tcattgttaaacttccttttgcctgatattttctcatctcataatgagtttgagtcatgg
tttgatctgtcaggaaagtgtaacaatgaagcaatgagggaggaagtggaagagaagaga
agggctcaagttgtagcaaaactacatgctatattgcgccccttccttcttagaagaatg
aaggctgatgttgagcagctgcttcctcgaaaaaaagaaataatattgtatgctaccatg
actgaccatcagaaggatttccaagatcatctaattaacaggaccttggagaaccattta
attgagaaggcaaactctggacgtggtatgaaagggaaacttaataatctgatgatccag
cttcggaagaactgcaaccatccggacctcttagagtctgcctttgatggctcatatttc
tacccacccgttgaagagataattggccagtgtggtaaatttcgcttgctggaccggcta
ttggaacggttgttagcccacaaacataaagtattgatcttcagccagtggacaaaagtt
ttggacatcatagattactactttagtgaaaagggacatgaagtgtgtagaatcgatggc
agtgtgaagctagatgaaaggaaaagacagatctcggatttcaatgattcgaacagcaat
tacagaatattcctcctaagcaccagggctggcggactggggatcaacctcactgcagct
gacacatgtatactctatgacagtgattggaaccctcaaatggatttgcaagccatggat
agatgccataggattggtcaaaccaagcctgttcatgtttacaggctggcaacagctcaa
tctgtagagggtcgtgtcttgaaaagggcttttagcaaattgaagcttgagcatgtggtg
attgggaaagggcagtttcaccaagaaaggaagtctagctctacagatgtctttgagcag
gaggatctgctggcattgctccgagaggaagaaacagctgaagacaagatgatacaaaca
gatattagcaatgaagatttggagagggtcttagaccgcagtgatctggttgttgatgca
ttgaacaatgacgaaaagtccaatggtggtggtgtttttcccctcaaaggtcctggctgg
gaggtggtgataccaactgcaaccggaggcatgctctctacccttaacagttaa
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