Carya illinoinensis (pecan): 122313026
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Entry
122313026 CDS
T08745
Name
(RefSeq) transcription factor SPEECHLESS-like isoform X1
KO
K20558
transcription factor SPEECHLESS
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122313026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122313026
Transcription factors [BR:
cill03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
122313026
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Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
122313026
NCBI-ProteinID:
XP_042983654
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Position
6:1294788..1298505
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AA seq
356 aa
AA seq
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MGDINFPDVFEEHEFGDTTLAEDDLFSIFEGLESVADFPLIDEALVGTKELGEKISTAPR
LVSQKSTSSSALQDHSGTEIETSPKSKRQKLSETTSSSEETNPEGQHRISHITVERNRRK
QMNDHLSVLRSLMPCFYVKRGDQASIIGGVIDYINELQQVLHSLEAKKQRKVYSTHLEVV
LSPRLVSSPRPSPLSPRSKPPLSPRVLNLPISPRTPQPSSPYKPRKKLQQAAGAGYLSPT
IPSALEPSPASSSTTSSINDNVNELVANSRSPIAEVEVKFTGPNVLLKTVSTRIPGQAMK
IISALEDLSLEILHLRIIPVDETILINSFTIKVGIECQLSAEELAQQIQQTFYQVL
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatatcaatttccctgatgtattcgaagaacacgagtttggagataccaccttg
gctgaagatgatcttttcagtatcttcgagggcttagaaagtgtggcggatttccctctg
attgatgaagctctggttggcacgaaagaattaggagaaaagatcagtacggcgccgaga
ttggtttctcagaagtctacatcgtccagtgcgttgcaagatcactcggggaccgagatc
gaaacatcgccgaagagcaagagacagaagctttcagagacgacgagttcttccgaggaa
acaaacccggaaggacaacataggatatctcatattacggtggagcgaaaccggaggaag
caaatgaacgaccatttgtcagtgttgaggtcacttatgccttgtttctatgtcaaaaga
ggagaccaagcatccataatcggaggggtgatcgattacatcaacgagttgcaacaagtt
ctacactcgcttgaggctaagaagcaacgaaaggtttacagtactcatcttgaagtagtc
ctgagccctaggctagtttcaagtccaagaccctcacctcttagccctagatcaaagcca
cctctgagccctagagtactgaatttacccattagcccaagaacaccacagccgagtagc
ccttacaagccaaggaagaagttgcaacaagctgctggtgctggttatctctctcccacc
attcctagcgctctcgaaccatcccctgcatcttcctctactacttcctctattaatgat
aatgtcaatgagctcgttgcaaattccaggtctcccatcgctgaagtggaagtgaagttt
acaggtccaaatgttctcttgaagacagtatctactcggattcccgggcaagccatgaaa
ataatctccgctctggaagacctctcccttgaaattctccacttacgaatcatccctgtt
gacgaaaccatcctaattaactccttcaccattaaggttggaattgaatgtcaacttagc
gccgaggagctcgcacagcaaattcagcaaacattctaccaagtgctctaa
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