KEGG   Coccidioides immitis: CIMG_05230
Entry
CIMG_05230        CDS       T01114                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
cim  Coccidioides immitis
Pathway
cim03030  DNA replication
cim03410  Base excision repair
cim03420  Nucleotide excision repair
cim03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cim00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CIMG_05230
   03410 Base excision repair
    CIMG_05230
   03420 Nucleotide excision repair
    CIMG_05230
   03430 Mismatch repair
    CIMG_05230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cim03032]
    CIMG_05230
   03036 Chromosome and associated proteins [BR:cim03036]
    CIMG_05230
   03400 DNA repair and recombination proteins [BR:cim03400]
    CIMG_05230
DNA replication proteins [BR:cim03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    CIMG_05230
  DNA Replication Termination Factors
   ELG1-RFC complex
    CIMG_05230
Chromosome and associated proteins [BR:cim03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    CIMG_05230
DNA repair and recombination proteins [BR:cim03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     CIMG_05230
  Check point factors
   HRAD17(Rad24)-RFC complex
    CIMG_05230
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA AAA_22 AAA_16 Rad17 nSTAND6 ATPase_2 T4SS-DNA_transf AAA_24
Other DBs
NCBI-GeneID: 4565033
NCBI-ProteinID: XP_001245789
UniProt: A0A0E1S3S8
LinkDB
AA seq 352 aa
MALLVDRQRPRTLDALTYHHELSARLKALAQSGDFPHLLVYGPSGAGKKTRIVATLKELY
GPGVEKIKIDARVFQTSSNRKLEFNIVASIYHLEITPSDVGTYDRVVIQELLKEIAQTQQ
VDLSAKQRFKVVVINEADHLTRDAQAALRRTMEKYSPNLRLILLANSTANIIAPIRSRTL
LVRVAAPTAEEICQVLKLSGKREGWSEAPGLNKRIAKESGRNLRRALLMFEAVYAQNEKV
TDDTVVPPPDWEALISLIADEIMAERSPARILQVRARLYDLLTHCIPPTTILKTLTFKLV
SKVDDILKPEVIKWSAFYEHRIKMGSKVIFHLEAFVAKFMRVLEGYLMGIDF
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggcactactcgtcgatagacagcgccctcgcacacttgacgccctcacatatcaccat
gaattgtccgcacgactcaaagctctggcacaaagcggtgacttcccccaccttctcgtt
tacggtccctctggagcgggcaagaagaccagaatagttgccacattgaaggagctatat
ggcccaggagtggaaaagataaaaatcgatgcccgtgttttccaaacctccagtaatcga
aagctcgaatttaacattgttgcttcaatatatcaccttgagatcacaccgtccgatgtg
gggacgtacgatcgcgtcgtgattcaggaactgctaaaggagatagcacaaacccagcag
gttgacttatccgcgaagcagcgattcaaggtggtggttataaatgaggccgatcacctt
actcgagacgcgcaggcggcgctgagaaggacaatggagaagtatagtccgaacctgaga
ctcattctactcgccaacagcaccgcgaacatcattgctcctatccgctccagaacgcta
ctagtaagggttgcagctccaacggcggaggaaatatgccaagtgttaaaactttcaggg
aaaagggagggttggagtgaagccccaggcttgaataagaggatagcgaaagagagtggc
aggaacctacgcagagcgcttcttatgttcgaagcggtatatgcgcaaaatgaaaaagtg
acagatgataccgtggtgccaccgccagattgggaagccttaatctcccttattgccgac
gagatcatggccgagagatctccagcacgaatacttcaggttcgggcacggctttacgac
ttgttaacacattgtatacctccaaccactatccttaagacattgaccttcaagcttgtg
tctaaagttgatgatattttaaaacctgaggttatcaaatggtcggctttctatgaacat
aggataaagatgggaagtaaagttatctttcacctagaagcgttcgttgcaaagtttatg
agagtccttgaaggctatttgatgggaatcgatttctaa

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