Coccidioides immitis: CIMG_10309
Help
Entry
CIMG_10309 CDS
T01114
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
cim
Coccidioides immitis
Pathway
cim03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cim00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
CIMG_10309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cim03041
]
CIMG_10309
03036 Chromosome and associated proteins [BR:
cim03036
]
CIMG_10309
Spliceosome [BR:
cim03041
]
Complex B
Other components
Prp19-related factors
CIMG_10309
Complex C
CIMG_10309
Chromosome and associated proteins [BR:
cim03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
CIMG_10309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
TPR_19
Suf
HAT
TPR_16
U3_assoc_6
TPR_CcmH_CycH
NRDE-2
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
4557894
NCBI-ProteinID:
XP_001239287
UniProt:
J3K181
LinkDB
All DBs
AA seq
671 aa
AA seq
DB search
MDSSRGPPRVKNKAPAPQQISAEQLLREAVDRQEPGLQAPTQRFADLEELHEYQHRKRRE
FEDYVRRNRINMNNWMRYAQWELEQKEFFRARSIFERALDVDSTSVVLWIRYIEAEMKSR
NINHARNLLDRAVTILPRVDKLWYKYVYMEEMLGNIAGARQVFERWMSWEPDEGAWSAYI
KLEKRYNEFDRARAIFERFTAVHPEPKNWIKWARFEEENGTCGLVREVFGLAIETLGDDF
MDERLFIAYARYETKLKEHERARAIYKYALDRLPRSKSAVLHKAYTTFEKQYGDQEGVED
VILSKRRVQYEEQVKENPKNYDAWFDYIRLEEASGNVERVRDVYERAIAQIPPSQEKRHW
RRYIYLWIFYALWEEMENHDFGRARQIYQECLKLIPHKKFTFAKVWLLKAQFEIRQMDLR
AARRTLGHALGACPKDKLFRGYIDLERQLFEFVRCRTLFEKQIEWNPSQTQAWIKFAELE
RGLDDLERARAIYELGISQPSLDMPELLWKAYIDFEEYEGEYDRTRSLYERLLEKTDHVK
VWINYARFEINIPENEDDEDEEKPVSEEAKSRARKIFERAHKVMKEKDLKEDRVALLNAW
KSFEQTHGTPTDITNIEKQMPRKVKKRRKLEEDRYEEYMDYVFPADDESTANLSKLLQKA
YQWKQEQGNIS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggactcgtcgcggggcccaccgcgggtcaaaaataaggccccagcgccgcagcagatt
tcagcagagcagctccttcgtgaagctgttgaccgccaggaaccaggtcttcaagcacct
acgcagcggtttgctgaccttgaagaactccatgaatatcaacacaggaaaaggagggaa
tttgaagattatgtgagaagaaacaggattaacatgaacaactggatgcgctatgctcaa
tgggaactggaacaaaaggagtttttcagggcccggtcgatatttgagagagcattggac
gttgattccacgtccgttgttttatggattcgatatattgaagcggaaatgaagtcacga
aacattaaccatgcaagaaaccttctcgaccgcgcggtgactattctacctcgagtggat
aaactatggtacaaatacgtatatatggaagaaatgttgggtaacattgcgggtgctcgg
caagtttttgaacgatggatgtcgtgggaacctgatgaaggcgcatggagcgcatacatc
aaactcgaaaagcgatacaatgaatttgaccgagctcgagccatctttgaacgattcaca
gccgtgcaccccgagcctaaaaattggatcaagtgggcccgttttgaagaagaaaatgga
acctgtggcctagtgagagaagtatttgggctggctattgagacgctgggtgatgacttc
atggacgagagactctttatcgcctatgctcggtatgaaacgaaattgaaggagcatgag
cgcgcgagagccatatataagtatgctcttgataggcttccacgttcaaaatccgctgtt
ttacacaaggcatacaccacctttgaaaaacaatatggtgaccaggaaggtgttgaggac
gtgattctttcgaaaagaagagttcagtatgaggagcaagtcaaggaaaatcccaaaaac
tatgatgcctggtttgattacattcgactcgaagaagcttctggaaatgttgaacgagtt
agagatgtttatgagcgagctatagctcaaattccaccatcccaggagaaacgtcactgg
cgtcggtatatctatttgtggatattctacgctctctgggaagaaatggaaaatcacgat
tttggaagggcccgtcaaatatatcaggaatgcttgaaattaattcctcataaaaagttt
acttttgccaaagtttggctattgaaggctcaatttgagatcaggcaaatggaccttcgg
gctgcgaggagaacactcgggcatgccctaggggcttgtccaaaagataagctattcagg
ggctatatcgatttagagcgacagctctttgaatttgtacgatgccggacactttttgaa
aagcagatcgagtggaatccctctcaaacacaggcatggatcaagttcgcggaattagaa
cggggattagacgaccttgaacgcgcacgcgcgatatacgagctcgggataagccagccg
tcattggatatgccagaattattatggaaggcatatatagatttcgaggaatatgaagga
gaatatgaccgcactcgaagtctgtatgagcggttgcttgaaaagactgaccacgtcaaa
gtctggatcaattacgcgcggtttgaaatcaacattcctgaaaacgaagatgatgaagat
gaagagaagcccgtcagtgaagaagccaaatcccgggctaggaagatattcgaacgggca
cataaggttatgaaggaaaaagatctaaaagaagatagagtggcattgctaaatgcatgg
aaatccttcgagcaaacccacggtacaccaacagatatcacaaatattgagaagcaaatg
ccgcgcaaagtcaagaagcgacgcaaactagaagaggatcgttacgaggaatacatggac
tacgttttccctgccgacgatgagtccacagcaaatctgtccaaactcttgcaaaaagcg
taccaatggaagcaggagcaaggaaacatctcatag
DBGET
integrated database retrieval system
