Cebus imitator (Panamanian white-faced capuchin): 108296171
Help
Entry
108296171 CDS
T08783
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cimi03019
]
108296171
Messenger RNA biogenesis [BR:
cimi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
108296171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
108296171
NCBI-ProteinID:
XP_017374066
Ensembl:
ENSCCAG00000018687
LinkDB
All DBs
Position
Unknown
AA seq
1696 aa
AA seq
DB search
MKLLQMQALKEGHGGENNIQNIYTIRNHPQPLITVLEHRPDCWPVFLQQLTAFFQQCSER
SEISCIQIMAPFLWYLYCEPSQLQEYAKLRLTLLKVLLQPQVHCDKEQPSILEQQILQLC
CDMVPCLQIKDLMQTTEVVLFIEEVYLSLLRHPAFWKTQLIQLTLQLLCVCEVSLKMTGE
CSSLIHLLEKSVELLKEDFPVELVIIGIALLLLQTPACQQKPLLNLALKLFSVTEDQKIP
KSSLLLVMPILQILSSTALEDCISMNEEGPSRQQLALNLLEMIQQECYRDDHQKLSYKLV
CPVTSMYGSIFAAWRILEVMRDVSAARDWLASVESLLPITTVMPVPAFLLLAYLLVEDKG
QNLHQILNVTTELAQADSSQVPNLIPVLMFKLGRPLEPILYNDILYTLPKLGVHKVCVGQ
ILRVIQLLGTTPRLRAVTLRLLTSLWEKQDRVYPELQRSMAMSDVPSLSVGKEVQWEKLI
AKAASIRDICKQRPYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIR
STWNALSPKLSCDTRPLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPI
VANAAYRSLSHFSAGEHTILHLPEKIRPEIPIPEELDDDEDEEDVDLSVPGSCYLKLLSL
TNPSVLPALEEFFTSLVKQEMVNMPRGIYHSALKGGARTDQGKTVAGIPNFMLKMYETNK
QPGLKPGLAGGMLFCYDVSTYQSKDGKPLHRLMASRGRSFKQTSLALVHEVHIQLSEWHR
AIFLPQAWLAYMNRAYHAVLQGRLGELELQLKHGKEGPEEVQYKKSTAWLWIRDMLTDEI
TKTAAKESPVVKGNALLALSSLAVVVCRHEASLSSDSDGLLEVQPNFLSMKDWISMVLDT
LLVIVDSHYQPRGQLLSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEI
LNMLTARLPGKPSADESQAVQIHMGLALGMFLSRLCEEKLSDVSGQEMNLLLMKSLDALE
NCCFDTSLEYNTGCMLGVGLVLSLMSHSSQMQSRVHVAASLRKLSAYLDDSGSQSRTFQE
VLAYTLSCVCTSAFSAGIIEAPEAEDVMNKLRMLAENSQQTSGFALALGNIVHGLSVCGH
GKAEDLGSKLLPAWIRIVLTEGSPTMLCLAALHGMVALVGSEGDVMQLKSEDIQTSHFQS
RLNEVIRTLTQVISVSGVIGLQSNAIWLLGHLHLSTLSSSQSRTSVPTDYSYLPESSFIG
AAIGFFITGGKKGPESVPPSLLKVVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQ
QLCLEIMVTQAQSSQNAAALLGLWVTPPLIHSLSLNIKRYLLISAPLWLKHVSEEQILGF
VENLMLAVFKAASPLGDSELCPSALQGLSQAMKLPSPAHHLWSLLCEATGKIFDLLPNKI
RRKDLELYIGIAKCLSEMTDDDANRVAQVTKSNIEKAAFVKLYLASQGRFPLLNLTDMLN
VAVQHHEKEVLAWMILQSLYQARIVSQASTGVLKRMEWLLELMGYIRNIAYQSTSVQNMA
LDEALDFLLLIFATAVVAWADHAAPLLLGISASWLPWHQENGLAGPAPSFLGRSPMHRVT
LQEVLTLLPSSMPLMLQKEPWKEQTQKFIDWIFSIMESPEEALSAKSRDLLKATLLSLRA
LPEFKKKAVWTRAYGW
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgaaattactacaaatgcaagctcttaaggaaggacacggtggggagaataatattcag
aatatatatactattagaaatcatcctcagcctttgatcactgtgcttgaacacagacct
gattgctggccggtatttttacagcagctgacagcttttttccagcagtgctctgaaagg
tcagaaatttcatgcattcaaataatggcaccatttctgtggtatctgtattgtgaacca
tctcagttacaagaatatgctaaacttcgactaactctgctgaaagtcttacttcaaccc
caggttcattgtgacaaagaacaaccgtcaatactggaacagcagatacttcaactgtgt
tgtgacatggttccatgtttgcagataaaagatttgatgcagacaacagaagtggtgctg
tttattgaggaagtgtatttaagccttttgcgtcatcctgctttctggaaaactcagctt
atccagctgactcttcagctgctgtgtgtctgtgaagtcagcttaaagatgactggagaa
tgttcatctttaattcaccttttagagaaaagtgttgaactcctgaaggaggattttcct
gttgaactggtcataattggaatagctttactacttctacagactccagcatgtcagcag
aagccgctcttaaatctagctttgaagctcttctctgttactgaggatcagaaaatccca
aagtcctctctgctgctagtgatgccaatcctgcagatactatcttctactgccttggaa
gactgtatatctatgaatgaagaaggtccgtctaggcagcagttggctctaaacctttta
gaaatgatacagcaggaatgttacagagacgaccaccaaaagctgtcctacaagcttgtg
tgccctgtaaccagtatgtatggttcaatatttgcagcctggaggattcttgaagtaatg
agagatgtgtctgctgcaagggactggttggcttcagtagagtccttgcttcctatcact
actgtgatgcctgtacctgcttttcttctgctggcttacctccttgttgaagacaaagga
caaaatcttcaccaaatactgaatgttactacagaattagcccaagcagattcgtcccag
gtgccaaatctgattccagttttgatgttcaaattaggaagaccactggaacctatatta
tataatgatatattgtatactttacctaagcttggtgttcacaaggtgtgtgtaggacag
attctacgagtaatacaactgcttggaaccaccccacgactaagagctgtcactttgcgc
ttgctgacatctttgtgggaaaagcaggaccgagtctatcctgaactgcagcgttccatg
gccatgtctgatgtaccttctctttcggtgggcaaggaagtccaatgggagaaactgatt
gcaaaagcagcctcaattagagatatatgtaagcagaggccatatcagcatggtgcagat
atgttagcagctatttctcaggtattgaatgaatgcaccaagcctgatcaagctactcca
gcagcattggtattacaaggtcttcatgcactctgtcaagctgaggttgtttgcattcgc
tccacttggaatgctctctctccaaagctgagttgtgacacaagacctctgattctgaag
acgctgagtgaactgttttctctggttccttctttaacagtcaatacaactgaatatgag
aattttaaagttcaagtcctcagcttcctatggactcatactcaaaacaaggacccaatt
gtagccaatgccgcatatagatccctgtcccactttagtgcgggagaacataccattctt
catctgcctgaaaagataagaccagaaattcccattcctgaagagttagatgatgatgaa
gatgaggaggatgtggatctttcagttcctggctcttgctatctcaaactgttgtcactc
actaacccttctgttttaccagctttggaggaatttttcacatcacttgtgaagcaagaa
atggtgaatatgcctcgtgggatatatcactctgcattaaaaggaggtgcccgcacagac
caaggaaagactgtagcaggaatccccaattttatgttgaaaatgtatgaaacaaacaag
caaccaggattgaaacctggccttgcaggtggtatgttattttgctatgatgtttcgacg
tatcagagtaaagatggaaaaccattgcatagactgatggccagtagagggcgaagtttc
aagcagacttcacttgctcttgtgcatgaggttcatatccagctttcagagtggcaccgt
gcgatttttcttccgcaggcctggcttgcgtatatgaatcgagcttatcatgcagtttta
cagggaagactaggagagctggaattgcagttaaaacatggaaaagaaggacctgaggag
gtgcagtacaaaaaaagcacagcctggctctggattagagacatgctgactgatgagatc
accaagacagctgcaaaggagagtccagtagtgaaaggcaatgcgctgttagccctaagc
agccttgcggtcgtcgtatgtagacatgaagccagcctctcctcagactctgatgggctc
ctggaggttcaacctaatttcctttcaatgaaagattggatttccatggtacttgatact
ctcttggtcattgtggatagccattaccaacccagagggcaacttctctcctggttttat
tataagtcctattctggtgaaaacacagctagtgccattgcccgttctgctgccgccacg
gctttgtctctccttgtgccagttttcattatctcttgcaaagagaaggttgaggaaatc
ctgaacatgctgactgccaggttacctgggaaaccaagtgctgatgagtctcaagccgtg
caaatccacatgggccttgctttagggatgtttctctctcgcttgtgtgaagagaaactc
agtgatgtatctggccaagagatgaaccttcttctgatgaagtctttggatgccctggaa
aattgctgctttgacactagtcttgaatacaacacgggctgtatgttgggagttggactt
gttctgtccctcatgagccacagcagccaaatgcagtcccgcgttcatgtggcagcatcg
cttcggaagctgtctgcgtacttagatgacagtgggagccagagcagaacgtttcaggag
gtccttgcctacacacttagctgtgtatgtacctcagcgttcagtgctggaattattgaa
gctccagaggctgaggatgttatgaacaagcttcgaatgttagcggagaacagccagcag
acttcaggttttgccctggcattaggaaacatagttcatggattgtctgtgtgtggacat
ggaaaagctgaagacttaggcagcaaactactccctgcctggatcagaattgttctaaca
gagggctctcccacaatgctttgtctggccgctcttcatggcatggtggccttggtaggc
tctgaaggcgatgtaatgcagctgaaatcagaagacatccagacctctcattttcaaagc
agacttaatgaagtcattagaaccttaactcaggtcatcagtgtctctggggtgattggt
ctccagtcaaatgcaatctggcttcttggacatcttcatctatctactctgtcctcaagt
caaagtagaacctctgttcctactgactatagctatttgcctgaaagcagttttattgga
gcagccattggcttcttcattacaggaggaaaaaaaggtcctgaatctgtgcctccttcc
cttcttaaagtagtgatgaaacccatagcaactgttggagaaagctaccaatatcctcct
gtgaactgggctgcacttctctctccacttatgaggctgaatttcggtgaagagatccag
cagttgtgccttgaaattatggtgacccaggcacagtcatcccagaatgcagctgcactt
ttgggcttgtgggtgacaccaccactgatccacagtctgagtctgaatatcaagaggtat
ctcctgatatctgcaccactctggttaaaacacgtctctgaagaacagatcctgggtttt
gttgaaaatttaatgctggcagtttttaaagcagcttccccacttggagattctgagctg
tgcccaagtgccttacagggtctgagccaggccatgaaactgcccagccctgcccaccac
ctctggagtctgctctgtgaagctactgggaaaatttttgatctcctgccaaataagatt
cggagaaaggatctagagctgtatattggcatagcaaaatgcctctcagaaatgacagat
gatgacgccaatcgggtcgcccaggttactaagagcaacatagaaaaggctgcctttgtc
aaactgtatttagcctctcaaggacgattccccttgttgaacctgactgatatgctgaat
gttgctgtgcagcaccatgagaaagaggtgctggcctggatgattctgcagagcttatac
caggcacggattgtgagccaggccagcacgggcgttttgaagagaatggagtggctcttg
gaactgatgggttatattagaaacattgcttaccagtcaacatccgttcagaatatggct
cttgatgaggctttggacttcttgttgctgatatttgcaactgcagtggttgcctgggcc
gaccacgctgcccctctcctcctcggtatcagtgccagttggttgccatggcatcaggag
aatgggctggctgggccagcaccaagcttccttggcaggagtccaatgcacagggtcact
ctgcaggaggttctcactctccttcccagtagcatgcctctgatgctgcagaaagagcca
tggaaggaacagacccagaagtttattgactggatattcagcatcatggaaagccctgaa
gaagccctctcagcaaagtccagggatcttttgaaagccaccctgttgtccttgagagct
ctaccagagtttaagaagaaagctgtatggaccagagcatatggttggtga
DBGET
integrated database retrieval system
