Cebus imitator (Panamanian white-faced capuchin): 108314929
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Entry
108314929 CDS
T08783
Symbol
SPG11
Name
(RefSeq) spatacsin
KO
K19026
spatacsin
Organism
cimi
Cebus imitator (Panamanian white-faced capuchin)
Pathway
cimi05014
Amyotrophic lateral sclerosis
cimi05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
cimi00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
108314929 (SPG11)
05022 Pathways of neurodegeneration - multiple diseases
108314929 (SPG11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cimi03400
]
108314929 (SPG11)
DNA repair and recombination proteins [BR:
cimi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
108314929 (SPG11)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spatacsin_C
Motif
Other DBs
NCBI-GeneID:
108314929
NCBI-ProteinID:
XP_037600045
Ensembl:
ENSCCAG00000035886
LinkDB
All DBs
Position
Unknown
AA seq
2388 aa
AA seq
DB search
MAAEEEVVSAASVHTAAMERVLPMLLVRVPAEAMGQLGSHAQLHTQQEVLGSLTAAGSLQ
VLSLAPGSQGGGRCCLEGPFWHFMWEDSRNSSTPTDKPKLLALGENYELLIYEFNLKDGR
CDAAILYSYSGEALQKLIEDQGISISLLSLRILSFCNNTSLLFINKCIVLHIIFPERDAA
IRVLNCFTLPLPVQAVDTIIDTQLCKGVLFVLSSLGWIYIFHVVDGTYVAHVDLTLHEED
TCNEHQQEPAKIFTSLKVSQDLDVVIVSSSNSAIAVNLNLYFRQHSGHLLCERTLEDLPI
QGPKGIDEDDPVSSAYSMKQTKFSFQIDRSWKAQLSSLNETIKNSRLKVSCCVPWFRDIL
HLESPESGNHSTSVTSWAFIPQDIMDGQYNFPQKDHAKTSDPGRPWKIMHISEQEEPLEL
KCVSVTGFTALFTWKVERMGCTIALWDLETQSMQCFSLGRKCIPIDSSGDQQLCFVLTVA
GIENRQLDTVDFFLKSKENLFNPSSQSSVPDQFDHFSSHLYLRNVEELIPALDLLCSAIR
GSYSEPQSKHFSEQLLNLTLSFLNKQIKELFIHTEDLDEHLQRGENILTGYINELRTFMI
KFPWKLTDAIDEYDVHENVPKVKESSIWEKLSFEEVIANAILNNKIPEAQTFFRMNSHSA
QKLEELIGIGLNLVFENLKKNNIKEASELLKNMGFNVKDQLLKICFYTPDKNIRNFLVEI
LKEKKYFSEKEKRTIDFVHQVEKLYLGHFQEHVPIQSFPRYWINEQDFFTHKSVLDSFLK
YDCKDEFNKQEHRIVLNWALWWDQLTQESILLPKISPEEYKSYSPEALWRYLTARHDWLN
IILWIGEFQTQHSYASLPQSKWPLLTVDVINQNTCCNNYMRNEILDKLARNGVFLAPELE
DFESFLQRLSRIGGVIQDTLPVQNYKTKEGWDFHSQFILYCLEHSLQHLLYVYLDCYKLS
PENCPFLEKKELHEAHPWFEFLVQCRQVASNLTDPKLIFQASLANAHILIPTNQASVSSM
LLEGHTLLALATTMYAPGGVSQVVQNEENENCMKKVDPQLLKMALTPYPKLKTALFPQCT
PPSVLPSDITLYHLIQSLSPFDPSRLFGWQSANTLAIGDAWSHLPHFSSPDLVNKYAVVE
RLNFAYYLHHGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVLGLSSFHVPSTGAACV
CFLELLGLDSLKLRVDMKVANIILSYKCRNEDAQYSFIRESIAEKLSKLADGEKATTEEL
LVLLEEGTWNSIQQQEIMRLSGESSSQWALVVQFCRLHNMKLSLSYLKECAKANDWLQFI
IHSQLHNYHPAEVKSLIQYFSPVVQDHLRLAFENLPSVPSSKMDSNQVCNKSPQELQGSK
EEMTDLFGILLQCSEEPDSWHWLLVEAVKQQAPILSVLASCLQDASAVSCLCVWIITSVE
DGVAAEAMGHIQDSIEDHAWNLEDLSVIWRTLLTRQKSKTLIRGFQLFFKDSPLLLVIEM
YELCMFFKNYKEAEAKLLEFQKSLEMLNTAATKVHPVIPAMWLEDQVCFLLKLMLQQCKT
QYELRKLLQLFVEREHLFSDGPDVKKLCVLCQILKDTSIAINLNIITSYSIENFQHECRS
ILERLQTDGQFALARRVAELAELPVDNLVIEEITREMQTLKHIEQWSLKQARIDFWKKCH
ENFQKNSISSKAASSFFSAQAHVACEHPTGQSSIEERHLLLTLAGYWLAQEDPVPLDKLE
ELEKEIWLCRITQHTLGRNQEETEPRFSRQISTSGELSFDSLANEFSFSKLAALNTSKYL
DLNSIPSKETCESRLDWKEQESLNFLIGHLLDDGCVHEASRVCQYFHFYNQDVTLVLHCR
ALASGEASVEDVHPEIHALLGSAELLEEEEPDVLLRRVHSTSSLDSQKFVTLPSNDEVVT
NLEVLTNKCLHGKNYCRQVLCLYDLAKKLGCSYTDVASQDGEVMLREILASQQPDRCRRA
QAFISTQGLKLDTVAELVAEEVTRELLTPSQGTGHKQMFSPTEESHTFLQLITLCQDRTL
VGMKLLDKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARMLTDNHLAPSEE
YGLVVRLLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDS
EKHNMIALCFSMCREIGENHEAAARIQLKLIESQPWEDSLKDAHQLKQLLMKALTLMLDA
AESYAKDSCVRQAQHCQRLTKLITLQIHFLNTGQNTMLINLSRHKLMDCILALPRFYQAS
IVAEAYDFVPDWAEILYQQVILKGDFNYLEEFKQQRLLKSSIFEEISKKYKQHQPTDMVM
ENLKKLLTYCEDIYLYYKLAYEHKFYEIVNVLLKDPQTSCCLRDMLAG
NT seq
7167 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaggaggaggtcgtgagtgctgcttccgtccacactgcggccatggagcgg
gttctacccatgctgttggtgcgggtccccgccgaagctatggggcagctgggctcccac
gcgcagctgcacacacagcaagaggttctggggagcctgacggctgcaggcagcctccag
gtgctttctttggcgcctggcagccagggcgggggtcgctgctgcctggagggccccttc
tggcactttatgtgggaggattctcgtaacagcagcacaccaactgacaagcccaaactg
ctcgctcttggtgaaaattatgaactgcttatctatgaatttaatttgaaagatggaaga
tgtgatgcagccattttgtatagctatagtggggaggcattgcaaaagctcattgaagat
caaggtatcagtatttccttattgtctttgagaatcctgtcattttgcaataacacatca
ttactattcatcaacaaatgtattgtcctgcatattatatttcctgaaagagatgccgca
attagagtactcaactgtttcacactacccttgcctgtgcaggcagtggacacaattatt
gacacacagctctgcaaaggagttctttttgttttgagtagcttgggctggatctacatt
tttcacgttgtggatggtacatatgtagctcatgtggatttaacacttcatgaagaagat
acgtgtaatgagcaccagcaggagccagccaagatttttacttcactgaaagtgtctcaa
gaccttgatgtagtgattgtgagctcctccaactccgcaattgctgttaacttaaattta
tatttcaggcaacactcaggacacctactgtgtgaaagaacactagaagaccttcctatt
caaggacctaaggggatagatgaagatgatcctgttagctctgcctacagcatgaaacag
accaagttttccttccaaattgataggtcttggaaagcccagctatcatcattgaatgaa
acaataaagaactccagactgaaggtttcctgttgtgttccgtggttcagggatattttg
catttggagtcacctgaatctggtaaccacagtaccagtgtgacaagctgggcattcatt
ccacaggacataatggacgggcaatataattttccacagaaagatcatgccaagaccagt
gatccaggaagaccatggaagataatgcacatcagtgaacaagaggaacccttagagctt
aaatgtgtgtctgtgacaggattcactgcattgtttacttggaaagtggaaaggatgggc
tgtactattgccctctgggatttggagacccagagcatgcagtgtttttcccttggcaga
aagtgtattcctatagacagtagtggagaccagcaactgtgctttgtattgacagtggct
gggatagaaaatcgtcagctggacacagtagatttctttctgaagagcaaggaaaatctt
tttaacccatcgtcacaatcgtctgtacctgatcagtttgatcatttttcatcccattta
tatttaagaaatgtggaagagttgataccagcattggatttactttgctcagcaattcgg
ggaagctattctgaaccccaaagcaaacacttttcagaacaattgcttaatcttacactg
tctttccttaacaagcaaataaaggagctttttattcatactgaagatctagatgaacat
ctgcaaagaggagagaacattttgactggctacattaatgaacttcgaaccttcatgata
aagtttccttggaagctaacagatgctatagatgaatatgatgtacatgaaaatgtcccc
aaagtaaaggaaagcagtatatgggagaaactcagctttgaggaagttattgccaatgcc
attttaaacaacaaaataccagaggcacaaactttcttcaggatgaatagtcattctgct
caaaaacttgaggagctgattggaataggcctaaatttggtctttgaaaatttaaaaaaa
aacaatataaaggaagcctctgaacttttgaagaatatggggttcaatgtaaaagaccaa
ttgctcaagatatgcttctatacacctgataaaaatatacggaactttttggttgaaatt
ttaaaagaaaaaaagtatttttctgaaaaagaaaaaagaactatagacttcgtgcatcaa
gttgagaaactttatttgggacatttccaagaacatgtgccaatccagtcatttcccagg
tattggataaacgaacaagattttttcacacacaagtctgttttggactcattcctgaag
tatgattgtaaagatgaatttaacaaacaggaacacagaattgtgttaaattgggctctg
tggtgggatcaactaacacaagaatccattcttctccccaagataagtccagaagaatac
aaatcatattcccctgaagccctgtggagatacctcacagctcgccatgattggttaaac
attatcctgtggattggagaatttcaaacccagcatagttatgcttcacttccacagagc
aaatggccccttctgactgttgatgttattaaccagaatacttgctgtaacaactacatg
aggaatgaaattttggataagttggccaggaatggggtttttctggcacctgaactggaa
gattttgaaagcttcctccaaagactaagccgtattggaggtgtaatacaggataccctc
cctgttcaaaactacaagaccaaagaaggttgggatttccattctcagttcattctatat
tgtttggagcacagtctgcagcatcttctttatgtctaccttgactgttacaaacttagt
cctgaaaattgtccctttttggaaaaaaaagagttacatgaagcacatccttggtttgaa
tttttagttcagtgtcgacaagttgccagtaatttaacagatcccaaactgatcttccag
gccagccttgcaaacgctcacattttgattcccactaatcaggccagtgtaagcagtatg
ctactggaaggacataccctcctagcccttgctactacaatgtatgctcctgggggtgtc
agccaggttgttcagaatgaagaaaatgaaaactgtatgaagaaagtggatccccagcta
ctaaagatggcattaactccttaccccaagctaaaaactgctcttttcccacagtgcact
cctcctagtgtcctgccatctgatattacactctaccaccttattcagtcattatcaccc
tttgatcctagcagattgtttggctggcagtctgctaacacactagctataggagatgca
tggagtcatctcccacatttctctagccctgacctggttaataaatatgctgtagtagaa
cgtctgaattttgcttattacttacatcatggacgaccatcatttgcgtttggtactttt
ctggtccaggaattaatcaagagcaagactcccaagcagctgatccagcaagtaggcaat
gaagcctatgttttagggctctcctccttccacgtaccttcaacaggagctgcatgtgtc
tgtttcttagaattgcttggacttgacagcctcaagctcagagttgatatgaaagtagcc
aatataattttgagctacaagtgtagaaatgaagatgctcagtacagttttatcagagag
tctatagctgaaaaactgtctaaactagctgatggtgaaaaggcaaccacagaagaattg
cttgttctcttagaagaaggtacatggaacagcattcagcaacaggaaataatgaggtta
tccggtgaatccagcagccagtgggccttagtggtacagttctgcaggctacacaatatg
aaactgagcttgtcttaccttaaagaatgtgccaaagcaaatgattggctgcagttcatt
attcacagccaactccacaactaccacccagcagaggtgaaatcccttatccagtacttc
agcccagttgttcaagaccacttaaggctggcttttgagaacttgccctcagtgccctcc
tccaaaatggacagcaatcaagtctgtaataagtccccgcaggaactccagggaagcaaa
gaagagatgacggatttatttggaattctgctacagtgttcagaggagccagactcctgg
cactggcttcttgttgaagcagtgaaacaacaggcccctatcctcagtgttctggcctca
tgtcttcaggatgccagtgctgtttcttgtctctgtgtttggatcatcacttctgtggag
gacggtgttgcagctgaagcaatgggacacattcaggactcaatagaggaccacgcctgg
aaccttgaggacctttcagtcatctggagaacattattaacaagacagaagagtaaaact
ctcatcagaggttttcaacttttctttaaggattccccattactgttggtgatagagatg
tatgaactgtgtatgttcttcaagaattataaagaagccgaagctaaacttctggagttt
caaaagagccttgaaatgcttaacacagcagccacaaaggtccaccctgtcatccctgcc
atgtggctggaggatcaggtgtgtttccttttgaagcttatgctacagcagtgtaagacc
cagtatgagctgaggaagcttctacagctatttgttgaaagagagcatctcttctctgat
ggtccagatgtgaagaaactgtgtgtcctttgccaaattttgaaggatacatccatagcc
attaatcttaacattattaccagctatagcattgagaattttcagcatgaatgtagatct
attttggaaagactgcagacagatggacagtttgctttggccagaagggtagcagaatta
gctgagttacctgtggacaacttggttattgaagagataacacgggaaatgcagacccta
aaacacattgaacagtggtcactaaaacaagcaagaattgacttctggaaaaaatgccat
gagaattttcagaaaaattcaatttcaagcaaagcagcttcttcctttttctcagctcag
gcccatgtggcatgtgagcacccaactggacagagcagcattgaggagcgccatctgctg
ctcaccctggcagggtactggcttgctcaggaggacccggtgcctctggacaagctggag
gagctggagaaggagatctggctctgccgcatcacccagcacacacttggaagaaatcag
gaagaaacagagcccagattttctcgacagatctcaactagtggtgaactttcctttgat
agtttagccaatgagttttccttctccaagttggctgctctgaacacatcaaaatactta
gaccttaacagcattccatccaaagagacatgcgaaagtagactggattggaaagagcag
gagtcactaaactttttgattgggcacctactggatgatggctgtgtgcatgaagcaagt
agagtatgccagtattttcatttttataatcaagatgtcaccttggtgttgcactgcaga
gcactggcctcaggagaagctagtgtggaggatgtgcacccggagatccatgctctctta
ggaagtgctgagctgcttgaggaagaagagcctgacgttctcctaaggagagtccacagc
acctcaagtctggatagtcaaaagtttgtgacattgccctccaatgatgaagtggtgact
aacttggaagtgctgacaaacaaatgcctccatgggaagaactactgtcgacaggtcctc
tgtctgtatgatcttgccaagaagttgggctgttcctacacagatgttgcttctcaggat
ggtgaagtcatgctccgggaaatcttggcctcacagcagcctgaccgatgcagacgagcc
caggccttcatcagcacccagggccttaagctagatactgtggctgaactcgtggcagaa
gaggtgacacgggagctgctgactccatcacagggaacaggacataagcagatgttcagc
ccaacagaggaaagccacacatttcttcagcttatcactctgtgtcaagaccgcacattg
gtaggaatgaagttgttggataagatttcctccgttccccatggggaattgtcttgcacc
acagagctcctgatcctggcacatcattgcttcaccctgacatgccacatggagggcatc
atccgagtcctacaggctgcccggatgctcacagataaccacctggcccccagtgaggag
tatgggctggtggtacggctcctcactggcattggaaggtacaacgagatgacatacata
tttgatttgctgcataaaaagcactacttcgaagtgctgatgaggaagaagctggatccg
agtggtaccctgaagacagccctgctggactatatcaaacgctgtcgtcctggagacagt
gagaagcacaatatgattgccctgtgcttcagtatgtgccgggagattggcgagaaccac
gaggcagctgcccgcatccaactgaaattgattgagtctcagccctgggaggacagcctc
aaggatgcgcaccagctgaagcaactactgatgaaagccctgactctaatgctggatgca
gcagagagctatgccaaggactcctgtgtgcgacaggcccagcactgtcagcggctcacc
aagttgataactctgcagattcactttctgaacactggccagaacacaatgctcatcaac
ttgagccgccacaagctgatggactgtatcctggccctacctcggttctatcaggcttct
attgtggctgaggcctatgattttgttccagattgggctgaaattttataccagcaagtg
attcttaaaggagattttaattacttggaagaatttaagcagcaaaggttattaaagtcc
agtatatttgaagagatttcaaaaaaatataaacaacatcagcctactgacatggtcatg
gaaaacctgaagaaattactcacatattgtgaagatatttacttgtattacaagttggct
tacgaacacaagttttatgaaattgtaaatgtgcttctaaaggaccctcagacgagctgt
tgtctgagggacatgctagcaggttag
DBGET
integrated database retrieval system
