Ciona intestinalis (yellow sea squirt): 100175058 Help Entry 100175058         CDS       T01056                                  Name (RefSeq) polyubiquitin-A isoform X1   KO K08770   ubiquitin C Organism cin  Ciona intestinalis (yellow sea squirt) Pathway cin04120   Ubiquitin mediated proteolysis cin04137   Mitophagy - animal cin04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:cin00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100175058  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     100175058    04137 Mitophagy - animal     100175058  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:cin04121]     100175058 Ubiquitin system [BR:cin04121]  Ubiquitins and ubiquitin-like proteins   Ubiquitins    100175058 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  ubiquitin Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 Ubiquitin_5 Motif Other DBs NCBI-GeneID:  100175058 NCBI-ProteinID:  XP_002119546 Ensembl:  ENSCING00000020815 LinkDB All DBs Position Unknown AA seq 761 aa AA seqDB search MQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLI FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKA KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT ITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR LRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQ QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSID NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL TGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH LVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGIPPDQQRLIFAGKQLED GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDSIDNVKAKIQDKEGI PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGI NT seq 2286 nt NT seq  +upstreamnt  +downstreamnt atgcagatctttgtgaaaactttgactggaaagaccataactcttgaagttgaggcatct gactctattgacaatgtcaaggctaagatccaagacaaagaaggaatcccaccagatcag caacgtcttatcttcgctggtaagcagcttgaagatggacgcacactgagcgattacaac atccagaaagagtctactcttcacttggttcttcgtctcagaggaggaatgcaaatcttt gtcaaaactttgacaggaaagaccatcactcttgaagttgaggcatctgactctattgac aacgtcaaagccaagatccaagacaaagaaggaattccaccagatcagcaacgtcttatc ttcgctggtaagcagcttgaagatggacgtacactgagcgattacaacatccagaaagag tctactcttcacttggttcttcgtctcagaggaggaatgcaaatctttgtcaaaactttg acaggaaagactatcactcttgaagttgaggcttctgattctattgacaacgtcaaagct aagattcaagacaaagaaggaatccccccagatcagcaacgtcttatcttcgctggtaag cagcttgaagatggacgtacactgagcgattacaacatccaaaaagagtctactcttcac ttggttcttcgtctcagaggaggaatgcaaatctttgtcaaaactttgacaggaaagact atcactcttgaagttgaggcttctgattctattgacaacgtcaaagctaagattcaagac aaagaaggaatccccccagatcagcaacgtcttatcttcgctggtaagcagcttgaagac ggacgcacactgagcgattacaacatccagaaagagtctactcttcacttagttcttcgt ctcagaggaggaatgcaaatctttgtcaaaactttgactggaaagaccatcactcttgaa gttgaggcatctgactctattgacaacgtcaaggctaagatccaagacaaagaaggaatt cccccagatcaacaacgtcttatcttcgctggtaagcagcttgaagacggacgcacactg agcgattacaacatccagaaagagtccactcttcacttggttcttcgtctcagaggagga atgcaaatctttgtcaaaactttgacaggaaaaaccatcacccttgaagttgaggcatct gattccattgacaatgtcaaagccaagatccaagacaaagaaggaatccccccagatcag caacgtcttatcttcgctggtaagcagcttgaagacggacgcacactgagcgattacaac atccagaaagagtccactcttcacttggttcttcgtctcagaggaggaatgcaaatcttt gtcaaaactttgactggaaaaaccatcactcttgaagttgaggcatctgattctattgac aatgtcaaagccaagatccaagacaaagaaggaatccccccagatcagcaacgtcttatc ttcgctggtaagcagcttgaagacggacgtacactgagcgattacaacatccaaaaagag tctactcttcacttggttcttcgtcttagaggaggaatgcaaatttttgtcaaaactttg actggaaagaccatcactcttgaagttgaggcatctgactctattgacaacgtcaaagcc aagatccaagacaaagaaggaatccctccagatcagcaacgtcttatcttcgctggtaag cagcttgaagacggacgcacactgagcgattacaacatccaaaaagagtctactcttcac ttggttcttcgtcttagaggaggaatgcaaatttttgtcaaaactttgactggaaagacc atcactcttgaagttgaggcatctgactctattgacaacgtcaaagccaagatccaagac aaagaaggaatccctccagatcagcaacgtcttatcttcgctggtaagcagcttgaagac ggacgcacactgagcgattacaacatccaaaaagagtctactcttcacttggttcttcgt ctcagaggaggaatgcaaatctttgtcaaaactttgactggaaaaaccatcactcttgaa gttgaggcatctgactctattgacaatgtcaaagccaagattcaagacaaagaaggaatc cccccagatcagcaacgtcttatctttgctggtaagcagcttgaagacggacgcacactg agcgattacaacatccagaaggagtctactcttcacttggttcttcgtctcagaggagga atctaa

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