Ciona intestinalis (yellow sea squirt): 100179065
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Entry
100179065 CDS
T01056
Name
(RefSeq) cell division cycle protein 20 homolog
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100179065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cin04121
]
100179065
03036 Chromosome and associated proteins [BR:
cin03036
]
100179065
Ubiquitin system [BR:
cin04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
100179065
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
100179065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_Aladin
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
RMC1_N
Beta-prop_SPT8
Tricorn_2nd
Beta-prop_ACSF4
Beta-prop_RIG_1st
Beta-prop_VPS8
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
100179065
NCBI-ProteinID:
XP_009858577
LinkDB
All DBs
Position
5:complement(1305772..1311410)
Genome browser
AA seq
531 aa
AA seq
DB search
MSSQFDFENEVNSLVRMDKPLQAGPIARWQRKANDLSGCGNLSLHNKSLNVSHHLSLNIS
PSKNRSMSQSVNKTPGSTRTPTSGKNKTPGKLKPSSKNSSLNRTPGHGDRFIPNRQATNF
ELGHYRIVSENGDQENSGSLAQEDYKRRMSENLQRASGIGGGERILAFKARPAAAEGYHN
NTKVLYSSCKKSMADRKKTRHIPTTASRILDAPDLGNDFYLNLLDWSSTNQLAVVLGPSV
YLWDASCGDITMLMTMEGENEYVSSVKWMPDGEHIAIGNSDAEVQLWDVAASKRMRNMKS
HAARVCSLSWNEYILSSGSLDGFIHHHDVRVPDHHVATLTGHSQEVCGLEWSKDGHHLAS
GSNDNIVNVYSHMDTKPMYSFTDHQSAVKAIAWCPWQSNVLASGGGSADRHIRFWNTHNG
SCIKSVDTKSQVCALKWSTHYKEIVSSHGYVHNQLTIWSYPSMHWVQDLMGHTSRVLYLA
MSPDGQTVCSGAADESLRLWDCFAVDPSSKKKTKTPSTATSSKINTLFSIR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccagtttgattttgaaaatgaagtgaatagtttggtaagaatggacaaaccg
ttacaagcaggtcccattgcaaggtggcaaagaaaagcaaatgacttatccggatgtggc
aatcttagtttgcacaataaatcattaaatgttagtcatcacctcagtttaaatatcagt
ccttcgaagaatcgttcaatgtcacaaagtgtcaacaaaacacccggttcaacaagaaca
ccaacttccggcaaaaacaaaacaccaggtaaactgaaaccttcgagtaaaaattcaagt
ttgaatcgaacacctggtcacggtgacaggttcattcctaaccgacaagcaacaaacttt
gagcttggacattacaggattgtgtcagaaaatggtgaccaagagaactctggatctctt
gctcaggaagattataagaggaggatgagtgagaatctgcagcgagccagtggtattgga
ggtggggagaggattcttgcttttaaagctcgtccagctgcagcagagggttaccataat
aatactaaggtattgtacagttcatgtaagaaatcgatggcagatcgtaagaagactcga
cacattccaaccactgcaagtcgaatactggatgctccagatcttggaaatgacttctat
ttaaatttattggattggagttcgaccaatcagcttgcagtcgtccttggaccatctgtt
tacctatgggatgcctcgtgtggtgacatcacaatgctgatgacaatggaaggtgagaac
gaatacgtatcatctgtcaagtggatgcctgatggtgaacacatagcaatcgggaacagt
gatgctgaagttcagttatgggatgtagcagccagcaagcgaatgagaaacatgaaaagt
cacgctgcaagagtttgttcgctttcatggaatgaatatattttatcaagtggttcatta
gatggttttattcaccaccatgatgtgagagtacctgaccatcatgttgctaccttaacc
gggcactcacaggaggtttgtgggttggaatggtcaaaggacggacatcacttagcgagt
ggaagtaatgataatattgttaatgtgtattctcacatggacaccaaacctatgtattcg
ttcacagaccatcagtctgctgtcaaggcaatagcatggtgtccttggcaaagtaatgta
ttagcatcaggtggaggaagcgctgatcgacatattagattctggaacacacataatggg
agttgtatcaagtcagtggataccaaatctcaggtatgtgcattaaagtggtcgacacat
tacaaagagattgtatcttcacatggatatgtacacaaccaactaactatatggtcctat
ccatcaatgcattgggtgcaggatctaatgggccatacttcaagggttctctacttagca
atgtcaccggatggacaaaccgtttgttcgggggctgccgatgaatctttgaggttatgg
gattgttttgctgtcgatccaagctcaaaaaagaaaactaaaactccctcaacagctaca
tcaagcaaaatcaatacgttgttttctattcgttga
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