Ciona intestinalis (yellow sea squirt): 100179213
Help
Entry
100179213 CDS
T01056
Name
(RefSeq) rap guanine nucleotide exchange factor 2-like
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100179213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
Motif
Other DBs
NCBI-GeneID:
100179213
NCBI-ProteinID:
XP_009858872
LinkDB
All DBs
Position
6:782493..796045
Genome browser
AA seq
1254 aa
AA seq
DB search
MNSEQLLPDEQIPDLLKEANFSFLDLNCFEVAVFLTRKDYKMFQATASTDFIEDLFHLDA
ELTQFKAFEDLVNRELFWVVTTLCNEPNLIQRSKIIKHFVKIAHHCKILKNLNSTFALIS
GLGYRAVSRMKQTWEKVPAKSNRLFEELQALMDPSRNMSKYRTLLNEMVSQPPVIPYIPV
IKKDLTFLDLGNDTKVEGLINFEKMRMIGKEVRNVCRLCAPDSTQILPSAAAQQRESEKG
SQNPIYLTLARRGRRSSFNNVRRLYEDQINVRRVKQYMQSIEVVSDEDKLMEMSKAVESV
IPSASNQQKRRNTTASLPSDSPSRSSKTLPAFPLRTSSNGSSSSLHSRNNSEPQLAAVPV
IALHPTRKKMPVSSLPKFGANSPQALRKLLSLSEEGGGNDKTGGKKLGTRRNGSVSSHDL
SPATSPYMSPKRREDAQHSVANENINRNNNRLSLPTGVVAEPPSPSIQSAPINSRKFFPP
GGSSATSSSRSSIASASSLGTVSSSNPTHSSLSSLGGSSSPRSSSPVGWGQSGGTTGPQL
GPHPSHTHYHQQGRTSSSSSADTVKSGAGRHHERPVIKQTRNGRSSSFGGGGMMSSAMMS
SIPDRRMNQMSSSTSTPSLSAPGSHQPLILPNHPQMPRTPSIDSGIVSVGSISSDSTRFN
PSDDAEIFGRVHHHPGHQRQHPGRHLDQLHHRINEQSQLSPHLRHGRSNPPPQLEEEDKV
EQTFLSGFRGHGDTPRPDTKVPSNFYPQSVTHVDHGGHPGEPMTIYGHVPPGQSRPMYMM
PRNFGKSGVKGIHDYLICERHAMMRSRQIYANHHITYHRPEPVKTPEALLEDQLVLELQK
QRPQLQRHKNSPISEDSNLSDKLSKSDPALNVPYPNPYEDPRIRLPPPARTSSPKSMIKQ
ASLPHPSPLSPCNDNVFSHNHSYHTPNDSRSSFSTPNHSRPHITPPYPQNTPTSTPNTSR
NIPTRAEDPSLNWQYPSRDPPIPRPTTLNTTSPYLNYSAQHGESALQDPITPQYDPHSNQ
YELYPIPVDMTPNSSIITTPHLPHSTQVPQHLINGSPGPQLRRKTSQDWNETDLDGEKNQ
QTMKAWGSSASLPATPLTSKSNNPQNPLPPHTLQPTLLHGSSISALTVTSKTKKPAPAPP
QRTSSFARSRQLRISSTTSPTSESPPLSPLTPTEHCSLDVSTTCNGWMGNGHVITNGYTP
SETRVAPLERRSLPTYTEAVNQINLKQSRFPAPLNNYRSFNIDAHENTEQVSQV
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgaacagctcctaccagacgagcaaatacccgatcttttaaaagaagcaaat
ttctcatttttagacctaaactgctttgaggttgcagtatttctgacacgtaaggattac
aaaatgttccaagccacggcttctactgattttattgaagatcttttccaccttgatgca
gaacttacacagttcaaggcttttgaagatcttgtgaatcgagagttattctgggtagta
acaactttatgcaatgaaccaaacttaattcaacgttcgaaaataattaaacatttcgta
aagattgcgcatcactgcaaaatactcaagaatttaaattcaacatttgctcttataagt
ggtttagggtacagagctgtatccagaatgaagcaaacttgggaaaaagtgccggcaaaa
tcaaaccgtttatttgaagagctacaagccttgatggatccgtcacgtaatatgtcaaaa
taccgaaccctgctaaatgagatggtctctcaaccaccagtgataccttatataccagtc
attaaaaaagatctcacatttttggacctcggtaacgacacaaaggtggaaggattaatc
aactttgagaaaatgcgaatgattggaaaagaagttcggaacgtgtgtcgtctctgtgca
cctgacagtacccagattctacccagtgccgctgcgcagcagagagagtccgaaaaaggc
agccagaaccctatctacctaaccctggcccgcagaggacgtaggtcttcgtttaacaat
gtaagaagactttacgaggatcagataaacgtacgacgcgtcaaacaatacatgcagtca
atagaagtcgtttccgatgaagataaattaatggaaatgtcgaaagctgtcgaatctgtt
ataccgagcgcctccaaccaacaaaaacgaagaaacacaaccgcatctcttccttcggac
tccccatcaagatcctccaagactcttccagcgttcccgctccgcacatcctctaacggc
tcaagcagcagtctccactcgagaaataactctgagcctcagctcgctgctgtaccagta
atagcccttcatccaacaagaaaaaagatgccagtttcatcgctcccaaaatttggtgcc
aattcaccccaagcgttacgaaagcttttatccctttctgaagaaggagggggcaacgac
aaaactgggggtaaaaaactgggtacccggcgaaatgggtcagtcagcagtcatgatctt
tcacccgcgacttcaccctacatgtcacccaagcgaagagaagatgcgcaacactcagta
gcaaacgaaaacatcaacagaaacaacaacagactcagtttaccaacaggtgtagtagca
gaacccccctccccaagcatccaaagtgctccgataaactctcgcaaattcttcccaccg
ggcggcagtagcgccacatccagctctcgttcaagtatcgcgagcgcatctagtctcggg
acagtctcgtcttcaaatccgacccattcgtcactttcctcactaggaggcagtagcagt
ccacggtcatcgtctccagtaggttggggccaaagtgggggaaccaccggcccccagttg
gggccacacccctcacacacccactatcatcagcaaggtcgtacgagttcaagttcttcg
gcagatactgtgaaatcaggagctggtcgccatcatgaacgccctgttatcaaacaaaca
cgtaacggacgaagcagctcgtttggcggtggtggtatgatgtcatcagcgatgatgtca
tcgatcccagaccgaagaatgaatcagatgtcttcttcaacttccactccatctctaagt
gctcctggaagccaccaaccactcattttacccaaccacccacaaatgccacgaacacca
agtattgacagcggcatcgtcagtgtggggtcgatttcatccgattcgacgagatttaat
ccttctgatgatgctgagatctttgggagagtccaccaccatccaggacatcaaaggcaa
catccgggaagacatttagatcagctgcatcacaggatcaacgagcagagccagctatcc
ccgcatcttcgtcacggaagatctaaccctcctcctcagttagaggaagaagacaaagta
gaacagacttttttatctggatttaggggtcatggggataccccgcgaccagatactaaa
gttccctctaacttttacccccaatcggtcacccacgttgaccatgggggtcacccaggt
gaacccatgactatatatgggcatgtgcctcctgggcagagcagaccaatgtatatgatg
ccgcgaaacttcggcaaaagcggcgttaaaggcatccacgattacttaatctgtgaacgg
catgctatgatgagaagtcggcaaatttacgcgaatcaccatataacatatcatcgccct
gaaccagttaaaacaccagaagcattactagaggaccaactcgttctagagctgcagaaa
caacgtccacaacttcagcgccataagaactctccgatttctgaagactcaaatttatcc
gacaaacttagtaaatcggacccagcgttaaatgtaccctaccctaacccctatgaagac
ccccgtatacgtctaccccctccagcaagaacatcatccccaaaatcgatgataaaacaa
gcgtcgttgccccacccctcacccctatctccctgcaatgacaatgtgttttcccacaac
cactcttaccacacccctaacgactctagaagctcattttcaacccccaaccactccaga
ccccacataaccccaccttacccccaaaacacccctacctctaccccaaacacttcacga
aatatacccactcgtgcggaggacccatcccttaactggcaataccctagtcgtgacccc
ccaattccgagacccactaccttaaacacgacatcaccctacctaaattacagtgcccag
cacggagaaagcgcgttacaggaccccataaccccacaatatgacccccattcaaaccaa
tacgaattataccccatcccagtcgacatgacccctaatagcagtataattaccaccccc
catttgccccatagcacccaagtaccccaacatttgataaacgggtcaccaggtccacag
ttacggcgtaaaacaagccaggattggaatgaaacagatctagatggtgaaaagaatcaa
cagacaatgaaagcttggggcagcagtgccagtttaccggcgacccctcttacttcaaag
tcaaacaacccccaaaaccccctaccaccccacacccttcaacccactttattgcatggg
agttctatcagtgcactgacagtgacaagtaaaacaaagaaacctgcgcctgcaccacca
caacgcacatcaagctttgcacgttcccgtcaacttcgtataagctccacaacaagtcca
acttcagagtcaccacctctgtcacccctaacaccaaccgagcattgctctcttgatgtt
tcaaccacttgtaatggttggatgggcaatggtcatgtgatcactaatggctatacacca
tccgaaactcgtgttgcacctttagaacgccgatcgctcccgacttatacagaagctgtc
aatcaaataaacttgaagcaaagtcgcttccctgctcctttaaataactacagatctttt
aatattgatgcacatgaaaacacagagcaagtatcccaagtatga
DBGET
integrated database retrieval system
