Ciona intestinalis (yellow sea squirt): 100181925
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Entry
100181925 CDS
T01056
Name
(RefSeq) DNA repair protein RAD51 homolog 4-like
KO
K10871
RAD51-like protein 3
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100181925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cin03400
]
100181925
DNA repair and recombination proteins [BR:
cin03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
100181925
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RAD51D_N
ATPase
DnaB_C
CobU
RecA_N
AAA_24
ATPase_2
ABC_tran
AAA_25
Rod_C
AAA_22
DUF7125
AAA_16
Motif
Other DBs
NCBI-GeneID:
100181925
NCBI-ProteinID:
XP_002128226
Ensembl:
ENSCING00000019579
UniProt:
H2XTM5
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Position
11:complement(549446..553351)
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AA seq
328 aa
AA seq
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MPSLLAGLCPALTQDVIVKLESKGIKEVLDFVAIDPERITAMCGIPYKKVMSIRRVLLAQ
YSSFPVNGLDLFHETMGTLAVLPTGCESLDDLLDAGIYTGEVTEIVGPSSSGKTQLCETF
AVNVAASFDQNVIYIDTAGGFSAVRVGEIFKKRFSSHNTSATLSRIRVSRCFEVSELRET
LDLVRRKMSAQDETFFSSLKVVIIDSVTSLLSTVLYNGTFVEGMASLQSIGRQLNALAKD
FALAVVITNDMVTGPQDKTGQFSRKPALGRVWTFVPSVRVQLQPHIAPCLHHVGVNKILA
RLTKSTRCGYRATSCVITSSGIESEKPS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccttctctactcgctggtttgtgcccggcattaacccaggatgttatcgttaaactg
gaaagcaaaggaataaaagaagttcttgattttgtggcaattgatcctgaaagaataact
gcgatgtgtggaatcccatataagaaagttatgtcaatccgtcgcgttctcctcgctcaa
tattcctccttccctgtcaacggactcgacctcttccacgagacgatgggcacgctcgct
gtcctcccaactggatgcgagagtctcgatgatcttctggatgcggggatctacacgggg
gaagtaacagagatcgttgggccgtcttcatctggaaagacacagctgtgtgaaacattt
gcggtcaacgtggcggcttcattcgatcagaacgtgatttacatcgatacggctggtggt
ttctctgctgtaagggtgggagaaatatttaagaaaagattttcttcccacaatacatca
gcaacattatctcgaatccgagtctcgcgatgttttgaagtttcagaacttcgtgaaaca
cttgatcttgtacggcgtaaaatgtcggcacaagacgaaacttttttctcatccctaaaa
gttgtgatcattgattcagtgacttcattactttcaactgtcctttataacgggaccttc
gtggaaggcatggcatctctacaaagcattggtcgacaactgaatgctcttgctaaagac
tttgctctagctgttgtcatcacaaatgacatggtaactgggcctcaggataaaacaggt
cagttcagtcgcaaaccagcacttggtagggtctggacgtttgttccaagtgttcgagta
caactacaaccacatattgctccttgtctccaccatgtgggtgtgaataaaatacttgct
agacttacaaagtccacacgatgtggctatagagctacatcatgtgttattacatcatct
ggtattgagtcagaaaagccaagttga
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