Entry |
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Name |
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
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KO |
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Organism |
cin Ciona intestinalis (yellow sea squirt)
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Brite |
KEGG Orthology (KO) [BR:cin00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cin03019]
100182195
Enzymes [BR:cin01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
100182195
2.7.7.52 RNA uridylyltransferase
100182195
Messenger RNA biogenesis [BR:cin03019]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
100182195
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:5026683..5029171
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AA seq |
778 aa
MTSVKQKQQSRNGTQCEVCSVFVPNEASMRDHLKGRKHIRNVEKQEHWLDSAVRSVYVSG
LKSLSAAELSLADYFSSFGAVKKVTIDKTAKHYAIIEMDSTETVDKILEKEKHTILGVNV
DVRLREIKPCKGRSKSQENEQGRYLSNETWTALFGCATVEEQVHTLKHLLMITEDDDYIR
NLICKLLGAALDEAFPGCEVQPFGSSVNGFGVHGCDLDLNFDYSSIHDDVMAGITQNMHE
TGTAEVSAEDMDRSHKSGVLLAIAEIIKQCVPDCHKIKTILNARLPVVRFYHKTSGVRCD
ISLKNDLAIHNTQYLQLCSQLTPNFSLLVFLIRAWMKHWKLAGNLQFNGTSLNNYAVTLL
VLFYMQNCNCIPKLKDLRKYSKTIKKIECFDCTIPDTPNLVVSACHTNDTPLLDLVSGFF
AFYTNIDFVNVVIDLSVNKIVSVSDDQLTMELHTIKSKFKYSALNIRDPFEVSHNVAANV
NQKHMKTFIRCTRNTTLVTKMKKYSQKPLSGNAIWGIMMLFVDQHNKNEAGEKHAHKGKE
TEHSFLISPPPSELVDQNTLCQTAGQFVITVLQDVFYVKIGKTTTNQTFTEDFSVSPEIH
DLTESIAVIQACPPSNQNNDVILHQSTNDRKRHADDRFNAPCKKSRISIVKNVIENPSTV
VQLPVKLSCIATQKVWQGRRKARRQIVQSGLSDLVQLERKISELLLSESSASAPNESLND
STSSDLSISMHFHLTMLAEEQKLKLTFEPGENSTDFVTFFHHIEVFLPPFVAKCMKRM |
NT seq |
2337 nt +upstreamnt +downstreamnt
atgacatccgtaaagcaaaagcaacaaagtaggaatggaacgcaatgtgaagtttgttct
gttttcgttcctaatgaagcatccatgagagatcacttaaaaggaagaaaacatattcgt
aatgttgaaaaacaagaacactggctggattctgctgttcgatctgtctatgtatcaggt
ttaaagtcactttccgctgctgaattatcattagctgattatttcagcagttttggagct
gtaaaaaaagtgaccatagataaaactgcaaaacactatgctataattgagatggacagc
acagagacagtggacaaaatattggagaaagaaaaacacacaattttgggagtaaatgtg
gatgtgagattaagagagataaaaccttgtaaagggaggtcaaaaagtcaagagaatgag
caaggacggtacttgagcaatgaaacatggactgcattattcggttgcgccactgtggaa
gaacaagttcatactttaaaacatcttttaatgatcactgaagatgatgattacatccgg
aatttgatttgtaagttgttgggtgcagccttagatgaggcttttccgggctgtgaggtt
caacctttcgggtcttcagttaatgggtttggtgtgcatggttgtgacttagatttaaac
tttgactattccagcattcatgatgatgttatggcaggaattacacaaaatatgcatgaa
acaggcactgcagaagtcagtgcggaagatatggatcgaagtcataagtctggggttctt
ctcgctattgcagagatcataaaacaatgcgttcctgattgtcacaaaattaaaacaatt
ttaaacgcccgacttccagttgttcggttttatcataaaacatctggtgttcgttgtgat
atcagcttgaaaaatgatcttgccattcacaacacacaatatttgcaattgtgtagccaa
ttgactccaaatttttccctgttagtgtttttgataagagcctggatgaaacactggaaa
ttggctggtaatttacagttcaatggaacaagcctgaacaattatgcggtcacactttta
gttctgttttacatgcaaaactgtaattgcattcctaaattaaaagatttgagaaagtat
tcaaaaacaataaaaaagatagagtgttttgactgtacaatcccagatacacctaatttg
gtcgtatctgcttgtcacacaaatgacacacctctgcttgacctggtgtctggatttttt
gcattttataccaacattgatttcgtaaatgtggtcatagatttaagcgtcaataaaatt
gttagtgtatccgatgatcagttaacaatggagctacataccattaaaagcaagttcaag
tactcagctctaaatatccgagatccatttgaagttagtcacaatgtggcagcaaacgtg
aatcaaaaacacatgaaaacatttatccgatgcacccgaaacaccacccttgttacaaag
atgaaaaagtattcacagaaaccactttcagggaacgctatttggggcataatgatgttg
tttgtggaccagcataacaaaaatgaagctggtgagaaacacgcacacaaaggaaaggaa
acagaacactcatttcttatcagtcctccaccctcagagcttgtagatcaaaacactctg
tgtcaaacagctggacaatttgtcattactgtcctacaagatgtgttttatgttaaaatc
ggaaaaactactacaaaccaaaccttcacagaggatttctcagtgtccccagaaattcat
gatttaacagaaagtatagcagtcattcaagcttgcccaccctcaaatcaaaataatgat
gtaattttacaccaatcaactaatgaccgtaagcgacatgcagatgatcgttttaatgca
ccttgtaagaagtcaagaatttcaattgtaaaaaatgttattgaaaatccatccacagtt
gttcaattaccagtaaagctctcatgtattgccactcagaaagtgtggcaaggccggcga
aaagcacgaaggcaaattgttcaatctggtttgtctgaccttgtacagcttgaacgcaag
atatctgagcttcttctatcagaaagcagtgcttctgcacccaatgagagcttaaatgac
agcacatcatcagatctgtcaatatcaatgcactttcatctcacaatgttagcagaagaa
cagaaacttaagttaacatttgaacccggagaaaactctacagattttgtaacatttttt
catcacattgaagtttttctgccaccttttgtagcaaagtgtatgaaacgaatgtaa |