KEGG   Ciona intestinalis (yellow sea squirt): 100182195
Entry
100182195         CDS       T01056                                 
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
  KO
K18709  speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:2.7.7.19 2.7.7.52]
Organism
cin  Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:cin00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cin03019]
    100182195
Enzymes [BR:cin01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     100182195
    2.7.7.52  RNA uridylyltransferase
     100182195
Messenger RNA biogenesis [BR:cin03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Poly(A) addition factors
     100182195
SSDB
Motif
Pfam: MTPAP-like_central PAP_assoc zf-met TUTase RRM_1 tRNA_NucTransf2 RRM_PARP14_3 zf-C2H2_jaz zf-U1 RRM_5 Calcipressin Orthopox_F14
Other DBs
NCBI-GeneID: 100182195
NCBI-ProteinID: XP_002130666
LinkDB
Position
8:5026683..5029171
AA seq 778 aa
MTSVKQKQQSRNGTQCEVCSVFVPNEASMRDHLKGRKHIRNVEKQEHWLDSAVRSVYVSG
LKSLSAAELSLADYFSSFGAVKKVTIDKTAKHYAIIEMDSTETVDKILEKEKHTILGVNV
DVRLREIKPCKGRSKSQENEQGRYLSNETWTALFGCATVEEQVHTLKHLLMITEDDDYIR
NLICKLLGAALDEAFPGCEVQPFGSSVNGFGVHGCDLDLNFDYSSIHDDVMAGITQNMHE
TGTAEVSAEDMDRSHKSGVLLAIAEIIKQCVPDCHKIKTILNARLPVVRFYHKTSGVRCD
ISLKNDLAIHNTQYLQLCSQLTPNFSLLVFLIRAWMKHWKLAGNLQFNGTSLNNYAVTLL
VLFYMQNCNCIPKLKDLRKYSKTIKKIECFDCTIPDTPNLVVSACHTNDTPLLDLVSGFF
AFYTNIDFVNVVIDLSVNKIVSVSDDQLTMELHTIKSKFKYSALNIRDPFEVSHNVAANV
NQKHMKTFIRCTRNTTLVTKMKKYSQKPLSGNAIWGIMMLFVDQHNKNEAGEKHAHKGKE
TEHSFLISPPPSELVDQNTLCQTAGQFVITVLQDVFYVKIGKTTTNQTFTEDFSVSPEIH
DLTESIAVIQACPPSNQNNDVILHQSTNDRKRHADDRFNAPCKKSRISIVKNVIENPSTV
VQLPVKLSCIATQKVWQGRRKARRQIVQSGLSDLVQLERKISELLLSESSASAPNESLND
STSSDLSISMHFHLTMLAEEQKLKLTFEPGENSTDFVTFFHHIEVFLPPFVAKCMKRM
NT seq 2337 nt   +upstreamnt  +downstreamnt
atgacatccgtaaagcaaaagcaacaaagtaggaatggaacgcaatgtgaagtttgttct
gttttcgttcctaatgaagcatccatgagagatcacttaaaaggaagaaaacatattcgt
aatgttgaaaaacaagaacactggctggattctgctgttcgatctgtctatgtatcaggt
ttaaagtcactttccgctgctgaattatcattagctgattatttcagcagttttggagct
gtaaaaaaagtgaccatagataaaactgcaaaacactatgctataattgagatggacagc
acagagacagtggacaaaatattggagaaagaaaaacacacaattttgggagtaaatgtg
gatgtgagattaagagagataaaaccttgtaaagggaggtcaaaaagtcaagagaatgag
caaggacggtacttgagcaatgaaacatggactgcattattcggttgcgccactgtggaa
gaacaagttcatactttaaaacatcttttaatgatcactgaagatgatgattacatccgg
aatttgatttgtaagttgttgggtgcagccttagatgaggcttttccgggctgtgaggtt
caacctttcgggtcttcagttaatgggtttggtgtgcatggttgtgacttagatttaaac
tttgactattccagcattcatgatgatgttatggcaggaattacacaaaatatgcatgaa
acaggcactgcagaagtcagtgcggaagatatggatcgaagtcataagtctggggttctt
ctcgctattgcagagatcataaaacaatgcgttcctgattgtcacaaaattaaaacaatt
ttaaacgcccgacttccagttgttcggttttatcataaaacatctggtgttcgttgtgat
atcagcttgaaaaatgatcttgccattcacaacacacaatatttgcaattgtgtagccaa
ttgactccaaatttttccctgttagtgtttttgataagagcctggatgaaacactggaaa
ttggctggtaatttacagttcaatggaacaagcctgaacaattatgcggtcacactttta
gttctgttttacatgcaaaactgtaattgcattcctaaattaaaagatttgagaaagtat
tcaaaaacaataaaaaagatagagtgttttgactgtacaatcccagatacacctaatttg
gtcgtatctgcttgtcacacaaatgacacacctctgcttgacctggtgtctggatttttt
gcattttataccaacattgatttcgtaaatgtggtcatagatttaagcgtcaataaaatt
gttagtgtatccgatgatcagttaacaatggagctacataccattaaaagcaagttcaag
tactcagctctaaatatccgagatccatttgaagttagtcacaatgtggcagcaaacgtg
aatcaaaaacacatgaaaacatttatccgatgcacccgaaacaccacccttgttacaaag
atgaaaaagtattcacagaaaccactttcagggaacgctatttggggcataatgatgttg
tttgtggaccagcataacaaaaatgaagctggtgagaaacacgcacacaaaggaaaggaa
acagaacactcatttcttatcagtcctccaccctcagagcttgtagatcaaaacactctg
tgtcaaacagctggacaatttgtcattactgtcctacaagatgtgttttatgttaaaatc
ggaaaaactactacaaaccaaaccttcacagaggatttctcagtgtccccagaaattcat
gatttaacagaaagtatagcagtcattcaagcttgcccaccctcaaatcaaaataatgat
gtaattttacaccaatcaactaatgaccgtaagcgacatgcagatgatcgttttaatgca
ccttgtaagaagtcaagaatttcaattgtaaaaaatgttattgaaaatccatccacagtt
gttcaattaccagtaaagctctcatgtattgccactcagaaagtgtggcaaggccggcga
aaagcacgaaggcaaattgttcaatctggtttgtctgaccttgtacagcttgaacgcaag
atatctgagcttcttctatcagaaagcagtgcttctgcacccaatgagagcttaaatgac
agcacatcatcagatctgtcaatatcaatgcactttcatctcacaatgttagcagaagaa
cagaaacttaagttaacatttgaacccggagaaaactctacagattttgtaacatttttt
catcacattgaagtttttctgccaccttttgtagcaaagtgtatgaaacgaatgtaa

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