Ciona intestinalis (yellow sea squirt): 100183607
Help
Entry
100183607 CDS
T01056
Name
(RefSeq) nuclear protein localization protein 4 homolog
KO
K14015
nuclear protein localization protein 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100183607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cin03009
]
100183607
Ribosome biogenesis [BR:
cin03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
100183607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPL4
zf-NPL4
UN_NPL4
OTU1_UBXL
FBA_2
RA_2
UBL_USP40
Motif
Other DBs
NCBI-GeneID:
100183607
NCBI-ProteinID:
XP_002123974
Ensembl:
ENSCING00000015372
LinkDB
All DBs
Position
Unknown
AA seq
565 aa
AA seq
DB search
MIIRIQSSDGTKRIEVSSSDTVASLLQQVEKSFALKGDGWGVFKSRNYQDEVKKSKSKLR
TAGLNHGDMLFLKSQSSVSKISEERPSSAVEAVEVVEDAIDVELWKNDGRIRRDDGSKGM
FKIENLSIEPWDEVYLKEKEIKFLSFHAYMRQQTAGVDKGKYFHLENFKAARKLDSNSKK
HSVVDLPSAVTLNRQKFRHVDNIMFENREIVDRFLNYWRKSGNQRMGYLYGRYSPHSEVP
LGIKAEVCAIYEPPQESTKNWLQFHPDPNEEAVEYIAKKLNLRKVGWILSDLTVEDRSKG
TVKNTRHSDTHFLTAEECITAATFQNNYPNPCKLASDGKYGSKFATVIVSGDNDCQISFE
GYQVSNQGMSLVADECLLPTLDAPELGYIRESSPELFVSDVYYKEKDKYGNEITKLARPL
PLEYLLTDVPTAFSLNSQYSCSNAVAGFPVPYRDTIGEVQSLSSLSKYLNQFKPDQFVDA
VSDFNLLVYLYSNDTISFKNEMDVLLDAVRTHDNGLASHWKECASWSTLEELMRHSNSPM
DTASSSHHSMDPEMREAIERSLQMQ
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgatcataagaattcagtcttctgatggtacaaaacgaatagaagtctcgagtagtgac
acagttgcctctctactgcaacaagtggagaaatcctttgcgcttaagggtgatgggtgg
ggggtgtttaaatcaagaaattaccaagatgaagttaaaaagtcaaaaagcaaacttaga
actgctggactgaaccacggagatatgttgtttttgaaatcacagtccagtgtttcaaaa
ataagtgaagaacgaccgtcatctgctgtggaagcagtggaagtggtggaggatgcaatt
gatgttgaattgtggaagaatgatgggaggataagaagagatgacggatcgaaagggatg
tttaagattgagaatctttcaattgaaccctgggatgaggtatatcttaaggaaaaagag
ataaaattcttgtcatttcatgcttacatgcgtcaacaaactgctggggtggataaagga
aagtattttcaccttgaaaactttaaagcagcgagaaaattggattcgaacagcaagaag
cattccgtggttgatctaccatctgcggtcactttaaatagacaaaagtttcggcatgta
gataacattatgtttgaaaatcgtgaaattgttgatcgtttcttgaattactggagaaaa
tccggcaatcaaaggatggggtatttgtatggacgttacagcccgcattctgaggtgcca
cttggtataaaagcagaagtttgtgcaatatatgaacctcctcaagaaagcacgaaaaac
tggctgcaatttcatccagaccccaatgaagaagcagttgaatatatcgctaaaaagttg
aatttacgaaaagtaggttggatcctttcagatttaacggtagaagaccgttcgaaaggg
acagttaaaaacactaggcactctgacactcacttcctgactgctgaagagtgtattact
gctgctacattccaaaataactatcccaacccatgcaaactcgcatctgatggaaagtat
gggtcaaaatttgctactgttattgtgtcgggagataacgactgccaaatcagttttgaa
ggctaccaggtatcaaatcaagggatgtcccttgttgccgacgaatgcttgttacctaca
ctagacgcaccagagcttggttatataagggaaagctcgcctgaattatttgtttctgat
gtgtattacaaagaaaaagacaagtatggtaatgaaatcactaaactggcacggccccta
ccattggagtatttgcttactgatgttcctacagcattctctctgaactctcagtactca
tgcagtaacgctgtagctggctttccagttccttacagagacactattggtgaagtacaa
tctttgtcgtcactttcaaaatatttaaaccagtttaaaccggatcagtttgtggatgct
gtgtctgattttaaccttctggtgtacctatacagcaatgatacaatctcatttaagaat
gaaatggatgtgctgttagatgcagtccgcactcatgacaatggccttgcaagtcactgg
aaagaatgtgccagctggtcgacactggaggagctaatgagacactcaaatagtccaatg
gacacagcctcgtcatctcaccactcgatggacccagagatgcgcgaagcaattgaaaga
agtttacaaatgcaataa
DBGET
integrated database retrieval system
