Ciona intestinalis (yellow sea squirt): 100185337
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Entry
100185337 CDS
T01056
Name
(RefSeq) chondroitin sulfate synthase 3-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
cin01100
Metabolic pathways
Module
cin_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
100185337
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
cin01003
]
100185337
Enzymes [BR:
cin01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
100185337
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
100185337
Glycosyltransferases [BR:
cin01003
]
Glycan extension
O-Glycan
100185337
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Fringe
DUF7961_C
Motif
Other DBs
NCBI-GeneID:
100185337
NCBI-ProteinID:
XP_009861406
LinkDB
All DBs
Position
Unknown
AA seq
763 aa
AA seq
DB search
MAGGKQPKKQFVPFCAGIACGIFISIILFIGFATPAILKSLWKSSVAPVLPKEIKYNDHG
YHPEIQPWEGNVVPSSINSTIPIDLEPEPVEVENPAWEVNLTPVHIPGFLLQELKLKKKV
FVGVINPSVVNTPNIELILKTWAKDWMENGDGDITIYTPMGVDITKTKKANIYYLSDVHN
QFSLQNLQEGTISMIYQTLEDICSQHIDAYHHFFVVGGNTYVSLDKLLNFTKRLDDSSVL
WIGHKEDTKDRFKHFINEPSSYCSSGPGFVLSRQALQLLCPRLPSCQRDYGSNTVPPGLQ
LARCVKRFLNTSCTYTDKDIFYKSPITPDPYSTSHPYDDSITVHPVLDDVTMFKLHHFFL
SQQLNETIRSNEYLHNIIQTMDRVLVQEGGMSDDRLILGRNGNENKYRHGDVITWDRVEH
GKGKTPDEILVVSEAEPKRELSKSDKISMDKVKVAAMTHYKEKLGDAREVKAGDIFRRVV
PGVGYQYMVDVLSGKDEVATVCLDQPYGRMTTIRSHTSPNVKVNFVLPLLEGSPYFKDFM
QMFEQACMSIDRAQNVALLVVLYTPGSGNGSFDEKNSDTLTQLNLYKQKYPALSLRWINA
GDRPFSSIGGTWMAVKALPADTLLCSTDLFMLMSPEYLHHARLNTVPGERLSFPVPFQRV
LPLDNDDEGISRSSGFWRSFDYGLFCGYKQDIMRACEGQNFASGADLYERALSTGLNVFR
APEHALSIGWHERECRDEQLSVDEQRNCEEMNKNLNLASSAIN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtggcaaacaacctaagaaacagtttgttcctttctgtgctggcattgcatgt
ggaatatttatctcaattatccttttcattggttttgccacacctgctatactgaagagt
ttatggaaaagtagcgtcgcacctgtgttgcctaaggagataaagtacaatgatcatgga
tatcaccctgaaatccaaccatgggaaggcaatgtagttccttccagcatcaactcaact
attcctattgatcttgaacctgagcctgttgaagtggagaacccagcatgggaagtgaat
ttgacgcctgttcatattcctggttttcttcttcaagaattaaaactgaagaagaaagtt
tttgtcggagtaatcaacccatcggtggtcaatactcctaacattgaacttatattgaaa
acatgggcaaaagattggatggagaatggtgatggtgacatcacaatatacactccgatg
ggtgttgacatcacaaagacaaagaaagcaaatatttattatctttcggatgttcataac
caattcagtcttcaaaatctccaagaaggaacaatttcaatgatctaccaaacattggag
gacatatgtagtcaacatattgatgcttatcatcatttctttgtggtgggtgggaacaca
tatgttagtttggataaactacttaacttcactaaaagattggacgactcaagtgttctg
tggattggccacaaggaagacacaaaggaccgttttaagcatttcattaatgagccttca
tcgtattgtagcagtggtcctgggttcgtattatcacgacaagcacttcaattgttgtgc
ccacgattgccttcatgccagcgtgactatggatcaaacactgtaccacctggattacag
ctagcaagatgcgtgaagaggtttctaaacacctcatgtacttatactgacaaggacatc
ttctataaatcccccatcacacctgatccttactccacctcccacccatatgatgacagc
atcactgttcatcctgtattagatgatgtcacaatgtttaaactccatcatttcttcctt
tcacaacaattgaacgaaacaatcagatcgaatgaatatctgcacaacataatacaaacc
atggaccgagttcttgtacaagaaggtggaatgtcagatgatcgacttatcctggggagg
aatgggaatgaaaacaaatatcgtcatggcgacgtgatcacatgggaccgagttgaacac
ggaaaggggaaaacccctgatgagatactggtagtcagtgaagcagaaccgaaacgcgaa
ttatcaaaatctgataaaatatctatggataaagtgaaagtggccgccatgactcattac
aaggagaaacttggtgacgcacgagaagtgaaagctggcgatatatttcgtcgtgttgta
cctggtgttggttaccaatatatggtggatgttttaagtgggaaggatgaggtagccact
gtatgcttggaccaaccttatggcaggatgactacgatacgaagccacacctcacctaat
gttaaagtcaactttgttcttccactgttagaaggttcaccttactttaaagatttcatg
cagatgtttgaacaggcttgtatgtcaattgaccgagcacagaacgttgcgttactagtt
gtcctgtacacccctggtagtgggaatggttcatttgatgagaaaaactcagatactcta
actcagcttaacttgtataagcaaaagtatccagctttgtcacttagatggataaacgca
ggggatcgtccattctccagcataggaggaacatggatggctgtgaaagctttacctgcc
gatactttgctatgctcaactgacttgtttatgttgatgtctccggaatatcttcaccac
gcccgactgaacacggttccaggtgagcgactttcgttcccagttccgttccagcgagtt
ttgccgttagataatgatgatgaaggaatatcaagatccagtggtttctggaggtcgttt
gattacgggttgttttgtggatataaacaagatataatgagagcttgtgagggacagaac
tttgccagtggagccgatttatatgagcgagcgttatcgaccggtcttaatgtgtttcga
gcacctgagcacgctttgtccatcgggtggcatgagagagaatgcagagacgaacagcta
tcggtggacgaacaacggaattgtgaagagatgaataaaaatcttaatctcgcttcaagt
gcaattaattag
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