Ciona intestinalis (yellow sea squirt): 100185478
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Entry
100185478 CDS
T01056
Name
(RefSeq) troponin C, skeletal muscle
KO
K12042
troponin C, skeletal muscle
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin04814
Motor proteins
cin04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
100185478
04820 Cytoskeleton in muscle cells
100185478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cin04812
]
100185478
Cytoskeleton proteins [BR:
cin04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
100185478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
AIF-1
EF-hand_9
EF-hand_FSTL1
EH
SPARC_Ca_bdg
SAPC2_N
Motif
Other DBs
NCBI-GeneID:
100185478
NCBI-ProteinID:
XP_026693006
Ensembl:
ENSCING00000006235
UniProt:
F6YCN8
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All DBs
Position
12:complement(13528..15963)
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AA seq
164 aa
AA seq
DB search
MSMTVEDARAKLDKEQISEFKQAFDIFDQDGGGDISTRELGRVMKMLGQTPSPEELAKIV
EEVDVDGSGTIDFDEFLIMMVMQISEEGKTASEEELKDIFLLFDKNGDSYIDWDELKEAL
SNTSAKPAVETWEVDELFKEADKNGDGVIDIEEWTLWMDGVQGH
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgacagttgaagacgcgagagcaaaattggacaaagagcaaatatctgaattc
aagcaagcgttcgacatcttcgatcaagatggcggcggtgacatcagcacgcgggagttg
gggagggtgatgaaaatgttgggacaaacaccaagtccggaggaacttgctaagattgta
gaggaagttgacgttgatggcagcggtacaatcgacttcgatgagttcttgataatgatg
gttatgcagattagtgaggaagggaagacggcgagcgaggaagaattgaaagatattttc
ctgctgtttgataagaacggcgacagttacattgattgggacgaattaaaggaagcgttg
agcaacacatcggccaaaccagctgtggaaacatgggaggtagacgagttgtttaaggaa
gcggacaagaacggagatggtgtcattgatattgaagaatggactttatggatggacggc
gttcaaggtcactaa
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