KEGG   Ciona intestinalis (yellow sea squirt): 100185478
Entry
100185478         CDS       T01056                                 
Name
(RefSeq) troponin C, skeletal muscle
  KO
K12042  troponin C, skeletal muscle
Organism
cin  Ciona intestinalis (yellow sea squirt)
Pathway
cin04814  Motor proteins
cin04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cin00001]
 09140 Cellular Processes
  09142 Cell motility
   04814 Motor proteins
    100185478
   04820 Cytoskeleton in muscle cells
    100185478
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cin04812]
    100185478
Cytoskeleton proteins [BR:cin04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Troponins
     100185478
SSDB
Motif
Pfam: EF-hand_1 EF-hand_7 EF-hand_6 EF-hand_5 EF-hand_8 AIF-1 EF-hand_9 EF-hand_FSTL1 EH SPARC_Ca_bdg SAPC2_N
Other DBs
NCBI-GeneID: 100185478
NCBI-ProteinID: XP_026693006
Ensembl: ENSCING00000006235
UniProt: F6YCN8
LinkDB
Position
12:complement(13528..15963)
AA seq 164 aa
MSMTVEDARAKLDKEQISEFKQAFDIFDQDGGGDISTRELGRVMKMLGQTPSPEELAKIV
EEVDVDGSGTIDFDEFLIMMVMQISEEGKTASEEELKDIFLLFDKNGDSYIDWDELKEAL
SNTSAKPAVETWEVDELFKEADKNGDGVIDIEEWTLWMDGVQGH
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtcgatgacagttgaagacgcgagagcaaaattggacaaagagcaaatatctgaattc
aagcaagcgttcgacatcttcgatcaagatggcggcggtgacatcagcacgcgggagttg
gggagggtgatgaaaatgttgggacaaacaccaagtccggaggaacttgctaagattgta
gaggaagttgacgttgatggcagcggtacaatcgacttcgatgagttcttgataatgatg
gttatgcagattagtgaggaagggaagacggcgagcgaggaagaattgaaagatattttc
ctgctgtttgataagaacggcgacagttacattgattgggacgaattaaaggaagcgttg
agcaacacatcggccaaaccagctgtggaaacatgggaggtagacgagttgtttaaggaa
gcggacaagaacggagatggtgtcattgatattgaagaatggactttatggatggacggc
gttcaaggtcactaa

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