Ciona intestinalis (yellow sea squirt): 100186186
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Entry
100186186 CDS
T01056
Name
(RefSeq) lymphoid-specific helicase-like
KO
K19001
ATP-dependent DNA helicase
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cin03036
]
100186186
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
100186186
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
100186186
NCBI-ProteinID:
XP_026696391
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Position
2:complement(2477046..2485946)
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AA seq
777 aa
AA seq
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MRIRVRFTPKRRVRTYSSSEHEETEESEEEMDIKEEDVNPPLLQPTRRSSRAVKKSTYCE
ASSDEEEKVEKKRKVPSKYKAKKKKKVDDDDEYKLSEHSEDDKEEMLSNDESAQNKSRGS
DEEGEVGPSDINIDELLENKFYRPDQKSVVEAVEDIGGIRYFNDQMVNPAQPKLLCGGML
RDYQITGYQWLKIMYENGESGILADEMGLGKTIQAIAMVCKLVEVGVNGPFLVCAPTTTV
ANWFNEFKKFAPKISLMLYHGTAPERYHLIETLMEHLNDKTQVVVITSYEILLRDRPALM
KHSWGYLILDEGHRVKNSNSRTIKELKKLTIRGKLMLTGTPIQNNLTELWSLLNFLLPAV
FDDMAIFRSWFNLDVLQKDEKVLSMLHQVLTPFLLRRSKSDVDIKIPPKREMLVMAPLAC
LQEKFYRATVDRSIRHLLINKDYFNITPGVAHPDLIASNSQEMKDETSLKYPTTRSKTIG
SMKRTIEPDDDFVVNVTLNNMIMQLRKCCNHPYLIQYPLQPGTDIFKVDEDLITSCGKMM
LLDRMLPVLKERKHKVLLFSQMTSMLDVLQDYCVMRKFSFVRFDGSTKCEDRFAYIEEFN
NDPNVFLFLLSTRAGGLGINLTGADTVIIYDSDWNPQNDSQAQDRCHRIGQERPVMVYRM
VTMATIDQQIMERAARKRTMEKMIMHEDKFKGKLAMELNKVVSPDELLTLLQSNSLDRVA
ENKESIISDEELNQMLDRSSLKQDQPTMEDESHQSTITDSPKARFQIIRTTVDTISV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgcgtataagagtaagatttactccaaagagaagagtgaggacatactcttccagtgag
catgaagagacagaagagtcagaggaagaaatggatattaaagaggaagatgtaaatcct
ccattgctccaacccactaggagatcatctcgagccgtaaagaaatcgacttattgtgaa
gcttcgtccgatgaggaggaaaaggttgaaaagaaacgcaaagttccctcaaaatacaaa
gcaaagaaaaagaagaaagttgatgatgatgatgaatacaaactatccgagcactccgaa
gatgacaaggaagaaatgcttagtaatgatgagtctgcacaaaataaatcacgtggttca
gatgaggaaggagaagttggtccatctgatatcaacattgacgaattactggagaataaa
ttttatcgtcctgatcaaaagtcagtagttgaagctgtggaagatattggtggtatcaga
tatttcaacgatcaaatggtgaatccggcccaacctaaattactatgcggtggtatgctg
cgtgattaccaaattactggctaccagtggctcaagataatgtatgagaatggtgaaagt
ggaatacttgctgatgagatgggacttggtaaaactattcaagcgatcgcaatggtgtgt
aagctggttgaggttggtgtgaatggtccgtttctggtgtgtgcaccaaccactactgtt
gccaactggtttaatgagttcaaaaagtttgcaccaaagattagtttaatgttgtaccac
ggaacggcaccagagcgataccatcttattgaaacattaatggagcatttgaacgacaaa
acacaagtcgttgtcatcacttcatatgaaattttgttaagagatcgacctgctttgatg
aaacacagctgggggtatttaatcttggacgaaggccatcgggtgaaaaactcaaacagc
agaaccataaaagaacttaagaaattaacgatacgtggtaagctgatgttaacgggcaca
ccaatacaaaataacctcacagaattgtggtcacttcttaatttcttgttaccagcagtg
tttgatgatatggccatttttcgaagctggtttaacttagatgttcttcagaaagatgag
aaagtattatccatgttacaccaggtattaacaccatttctgttgcgaagatcgaaaagt
gatgttgacatcaagattcctccaaagagagaaatgctggtcatggctcctctcgcttgc
ctccaggagaagttttatcgagcaacagtcgatcgctcgattcgtcatcttttgatcaac
aaagattatttcaacatcacacctggtgtagctcatcctgatcttattgcaagtaatagt
caagaaatgaaagatgaaacttcacttaaatatccaactaccagaagtaaaacaattgga
tccatgaagcgaacaattgaaccagatgatgattttgttgtcaacgtaactttaaacaac
atgatcatgcagcttcgtaaatgttgtaatcatccttaccttattcaataccccctgcaa
ccaggaactgacatttttaaggttgatgaagatctaataacatcttgtgggaagatgatg
ttgctggatcggatgttgccagttttgaaagaaaggaaacataaggttcttttgttcagt
cagatgacatcaatgcttgatgttttgcaagattattgtgttatgaggaagttttccttt
gtgaggtttgatggctccactaaatgtgaagacagatttgcttatatcgaggagtttaat
aatgaccccaatgtgttcctcttccttctttcaacaagagctggaggattagggatcaac
ctcactggagctgacaccgtgatcatctatgactcagattggaaccctcagaatgactca
caagcacaagatcgatgtcatcgtattgggcaggaacgaccagtgatggtgtataggatg
gttaccatggcaaccattgatcagcaaattatggagagagcagcgaggaagagaacaatg
gagaaaatgatcatgcacgaggataaattcaaaggcaaactggcaatggagttgaacaaa
gttgtttcaccagatgaacttctcactttgctacaatctaattctctggatcgtgtggca
gaaaacaaagaaagtattataagtgatgaagaattaaatcaaatgctggatcgttcaagt
ttaaaacaggaccaaccaactatggaggatgaatcacatcaatctactattacagattct
cctaaagccagatttcaaattattcgcacaactgtagataccatttctgtttaa
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