Ciona intestinalis (yellow sea squirt): 101243108
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Entry
101243108 CDS
T01056
Name
(RefSeq) short transient receptor potential channel 4-like
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cin04040
]
101243108
Ion channels [BR:
cin04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
101243108
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GFIT
Motif
Pfam:
Ion_trans
Ank_2
Ank
Ank_5
PKD_channel
Ank_KRIT1
TRP_2
CoA_binding_3
YVC1_C
DUF7014
Motif
Other DBs
NCBI-GeneID:
101243108
NCBI-ProteinID:
XP_026689852
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All DBs
Position
4:complement(3761225..3766261)
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AA seq
676 aa
AA seq
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MKFPDCGLQKNCVDQNDFSALRVAIEKNSVAMCRVLLKEKVDVGDCLFHAIQKNQTDIVE
VILKYDPSTQTRIRQNSCFQPGLTPVSMAAGQNNYDILNILLEHGHHDLEKETAEDTFEI
DSSSWECANIRRLLFKARSSPAYITTMCERNEVDPMNFCMRLVRSIRENAAVEYEYSQFY
DNLQSQIEDFLCSLLNQIRSSEELSRLFKYSRIEKQRSAKLGPRRNEVSLDFLEIAAKGN
LKKVVTHQNCQLALSHMKVRNTPSLGETNLGHVECLCVLIGLLFPILSLFYIVAPKSKIG
RFTTQPIVAFHSNLMSQIAFVALACARTIEVDSDESINYWITIWVFGILVQQIQACINSG
IRSHFSDVWSDVDLVGVLLYLLAEAIKDYSLYVDGDMGRYKDTVIGLEALSLNLFLLKCL
GMLKSNRWVGPVLASMGRMFGDLLIMFTGVLFWVVLSFSVGFAQLFQQSCKIEASHICDP
NKFKTFPESILTLGKVIFQQADAPESIETLPSHTSRVFAWVILYAFNLIVMLILWNMLIA
MMTKSYEETSENEELEWKFYRTELWIRFIRREFIRPPPMNLIPHPYLIRKYLRILWRWLL
SRQIKEGDRNVAGTIITMEKRRHAARYDAKYIEKLHNMILQRASVQVLCNLIWRYKNREL
VGKPGQPTSHARVPDF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccccgactgtggccttcagaagaactgtgttgatcaaaatgacttctccgct
cttcgagtggctatagagaaaaacagcgtagcgatgtgccgagttttgttaaaagaaaag
gtcgacgtcggagattgcctttttcatgcaatacaaaagaaccaaactgacatcgtagaa
gtaatattgaaatatgatccttcgacgcagaccagaataaggcagaactcatgctttcaa
ccgggattaaccccagtttcaatggcggcaggacagaataactacgacattttaaacatt
ttactggaacatggccatcatgacctagagaaagaaactgctgaagacacttttgagatt
gatagcagctcgtgggagtgtgcgaatattcgacgactattgtttaaagcgaggtccagt
cccgcctatataacaactatgtgcgagcgaaacgaagttgatccgatgaatttctgcatg
cgacttgtgcgatctattcgagaaaatgcagctgtggaatacgaatacagtcaattttac
gataaccttcaatcccagattgaagattttctttgttcgttacttaatcagattcggtca
tcagaagagctctctcgtttgtttaagtattcaagaatcgaaaaacaacgatctgcaaaa
ctcggaccacgcagaaatgaagttagtttggattttctggaaattgcggctaaaggaaac
ctaaagaaagttgttacgcaccaaaattgccagttggcattatctcacatgaaagttcgc
aacacaccttccctgggggaaacaaacctggggcacgtggaatgtttatgtgtgttgatt
gggttgcttttccctattttgagcctcttctacatcgttgcaccgaagagtaaaattgga
agattcacaacccagccgattgttgccttccacagcaacttaatgtcgcaaattgcattt
gtagcacttgcgtgtgctcgaacaatagaggtggacagtgatgaatctatcaactattgg
attacgatttgggtattcggcatactggtgcaacaaattcaagcgtgtattaacagtggt
atacgaagccacttttctgacgtttggagcgatgtcgacctggttggggttctcttatac
ttactggcagaggcaatcaaggattacagtttgtacgtagatggtgatatgggaagatat
aaggatacggtaatcggattggaggctctttcccttaatctatttctcttaaaatgtctt
ggaatgttgaagagcaaccgctgggtggggccggtgttggcttccatgggccgaatgttt
ggagatttgctgatcatgttcacgggtgttttgttttgggtcgttttatcattttctgtt
ggttttgcccaactattccaacagtcctgtaaaatcgaagcctcgcatatttgcgatcca
aataagtttaaaacctttccagagtcgatactcactcttggaaaggtcattttccagcaa
gctgacgcgccagagagcatagagacccttccatcacatacgtcgagggtattcgcatgg
gtgattctctatgcgtttaaccttattgtgatgttgatcttgtggaacatgctgatcgcc
atgatgacaaaatcctacgaagaaactagcgagaatgaagaactggagtggaagttttat
cggacagagctctggattcgttttatccgacgagagtttatccgcccgcctccgatgaac
cttattccgcacccatacttgatccggaagtacctgcgcatcttgtggcgatggctgtta
tctcgacagattaaagagggagatcgaaacgtcgcggggactattattactatggaaaaa
agaaggcatgctgcaagatacgacgcaaagtacattgaaaaacttcataacatgatactc
caacgtgcaagtgttcaggttctctgcaatctaatatggcgatacaagaatcgtgaactc
gtgggaaaacctggacaaccaacatcacatgctagagttcctgatttttaa
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