Ciona intestinalis (yellow sea squirt): 113474000
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Entry
113474000 CDS
T01056
Name
(RefSeq) PAX3- and PAX7-binding protein 1-like
KO
K13211
GC-rich sequence DNA-binding factor
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cin03041
]
113474000
Spliceosome [BR:
cin03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
113474000
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
Xol-1_N
Motif
Other DBs
NCBI-GeneID:
113474000
NCBI-ProteinID:
XP_026690203
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Position
4:3532107..3534679
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AA seq
790 aa
AA seq
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MFKKSNKSKLRKRRNSVEEDEDLDKKNNSSKNNQTETVVNPKTEKVKKSKKPAAVSLLSF
DDEEEESEIQLKKSSRSKRIAKKIKKRTQEEKEAELNPQVAQIKPSKFVKENAPETHIFR
PKAAAPEVEEKPRFQPHTVTKGAIPSPSMIHAARKQREMLRKFGSEFIPVDDTQTYKENK
SRLVREDDYDNSSDDEIIEMKGIKSNKSIQSNKYVPNESEESEDGENNEANVDEEVNRWE
EEMIKKGSQQIPGQPEQMYLYQAAAPQPAPYDSYGFGQSYYAPEAQNPVPVNNVEAKSNL
TFEIIKKRLSEHLVSAKEVHRSHKAEMDSIVFDTKENTEMSKQLTDNSKVSDEYRFYQEM
KDYVKNLVACLREKVPDINNMEKAASVMWKTRSENLIGRRIQDVRDESSKFMSGKAALEK
GNHLQDAELTQRVREREARRTRRRADRQIKKKDAEHHDGCSSDDEVTSMEEAKISAEISR
LQKESSELFDDVVDEFCEIKCILKHFETWRTDHSDSYNDAYIALCIPKLLVPFIRFETLL
WNPLNGDSAPLEQAEWFKTLSWYGMHCIDDVGDHANMDDTKVLANLYEKVILQKLVQLIK
EVWDPLSTFQTVNLVSFMNNLSGYPFMASDNRHCQQLVQAICTRFQNSLNNDVYIPLLPS
SVKTEAAPFLERQTWSSIKLFKNVLLLHEFLSFEAITELAFDSLLNRYIILALQTCPLSK
SCLLKCKEIVSSIPRDWFAKYPDLLCHLSTLTRFLEHFSKSVASSSLPADNLLKKKVNIL
LLEINSKFTT
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagaaaagcaataaatcaaagttgcggaaaagaagaaactctgtagaagaggat
gaagacttggataaaaagaataattcatcaaaaaataaccaaactgagactgttgtaaat
cctaaaacggaaaaggttaaaaaatcaaagaagcctgcagcagtgtcactcctcagtttt
gatgatgaagaagaagagtccgagatccagctgaaaaagtcttccaggagcaagcggatt
gcaaaaaagatcaaaaaacgaactcaagaggagaaagaggcggaattaaaccctcaagtc
gctcagataaaaccgtctaagtttgtcaaagagaatgctccagaaactcatattttccga
cccaaggcagccgcaccagaggttgaggagaaacctcgtttccaaccacatacggttaca
aaaggagcgatcccatcaccatccatgatccatgcggctcggaagcaaagggagatgtta
aggaagtttggatcggaatttatccccgtggatgacacacagacttataaagaaaataaa
tctaggttggtgagggaagatgactatgataacagcagtgatgatgaaattattgagatg
aagggaattaagagcaataagagcatccagtctaataaatatgttcctaatgaatctgag
gagtctgaggatggagaaaataatgaagcaaatgtggatgaagaggttaatagatgggag
gaagaaatgataaagaaagggagtcagcagattcctggtcaacctgagcaaatgtatctg
tatcaagctgctgcaccacaacctgctccgtatgatagttatgggtttggtcagtcctat
tatgctcctgaggcacaaaatcctgtaccagtgaataatgtagaagcaaaaagtaattta
acgtttgaaatcattaaaaaacgcttgagcgaacatctggtatctgctaaggaagtacac
agaagccacaaagctgaaatggactcaattgtttttgatactaaagagaacacggaaatg
tcaaaacaactcactgataactcaaaagtttcagatgaatatcgcttctatcaagaaatg
aaagattatgtcaaaaacctggttgcctgtcttcgtgaaaaagttccagatattaataat
atggaaaaagcagcgagtgtgatgtggaagacacgatctgaaaatctaatcggccggagg
atacaagatgttagagatgagtcctccaagtttatgtccgggaaggcagctttggaaaaa
ggtaatcatcttcaagatgcagagctcacacaaagagtccgggagcgggaagcaaggagg
acacgaagaagagctgatagacaaataaagaagaaagatgcagagcaccatgacggttgt
tcttcagatgatgaagtcacatcaatggaagaggcaaagatttcggccgaaataagcagg
ttacaaaaggagtcgagtgagttgtttgatgatgtagtggacgagttttgtgaaataaaa
tgcatcctgaaacattttgagacttggaggactgaccattcagattcatacaatgatgcg
tacatcgcactctgtatacctaaactattggtgcctttcatacgattcgaaactttactg
tggaatcctctaaacggtgattcagcaccattggaacaagcagagtggttcaaaacactt
agttggtatggaatgcactgtattgatgatgtcggagatcatgctaacatggatgacacc
aaggttcttgctaatctatatgaaaaagtgattcttcaaaagctggttcagttgatcaaa
gaagtgtgggatccactatctacatttcaaactgtaaatttggttagttttatgaataat
ctttctgggtatccgttcatggcttcagacaaccgacactgccaacaactcgtccaagcc
atttgtacccgttttcaaaattcattaaataatgacgtttatatcccattacttcccagc
agtgttaaaacagaagctgctccatttttggaaagacagacatggagtagcataaaactg
ttcaaaaatgtgctgcttctgcatgagtttttgtcattcgaagctattacagaacttgca
tttgattccttgctaaacagatatattatacttgcattgcaaacctgcccacttagtaaa
tcgtgcttgcttaaatgtaaagaaattgtatcttccataccaagagactggtttgcaaaa
tatcctgatctcctgtgtcatctttccacactcaccagatttcttgagcatttctcaaaa
tctgttgcttccagttctttacccgccgataacttactgaaaaagaaagtgaatatttta
cttcttgaaataaattcaaagtttacaacgtaa
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