Ciona intestinalis (yellow sea squirt): 113474347
Help
Entry
113474347 CDS
T01056
Name
(RefSeq) nuclear pore complex protein Nup205-like
KO
K14310
nuclear pore complex protein Nup205
Organism
cin
Ciona intestinalis (yellow sea squirt)
Pathway
cin03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113474347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cin03019
]
113474347
03036 Chromosome and associated proteins [BR:
cin03036
]
113474347
Messenger RNA biogenesis [BR:
cin03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113474347
Chromosome and associated proteins [BR:
cin03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113474347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Nup188_N-subdom_III
Motif
Other DBs
NCBI-GeneID:
113474347
NCBI-ProteinID:
XP_026690791
LinkDB
All DBs
Position
7:complement(1387896..1397926)
Genome browser
AA seq
851 aa
AA seq
DB search
MELNNWSPFKDLFTASQDFALRNSQASTHLLRSLLRKHKPELLSLLKNSPQNATHREKLK
NSHSVGLVINENESPKVFEQTFIDEAIIISDMFKLNELAAVDLLLTGEQQTPNYPNYSRG
LVAVLLYWDGRRNLASSLRTLVQCRRGATWTLDISPEGTSMVTSFSDELLSNGMTQQILK
LLREIKVEAEMEKLASQRGLGDSKHRKQVRDLITEVRQCLAETLFYFAGQSRLPLNDITA
MIHYLETDGEVESDGKLSLPTLAVLFAVLYAISLPYDLNTIQDESTVEELLQHPLITDAS
YLSGIHKVLAKESNHPSSWKVSGVRSCLQLAWSVTLRLLAQIPSSLLSGITPPSGEILEQ
DELVVEMALADRVFLFIKENIVLCPSFHSEEFYLRRIHGIITDLIVNMTLKVKEMRNHGD
EVARILMLHLAQGEEPPPSLRKDFHQLLELITALYEDDPLSLELCSEYWCTADTSMMDAG
SYIISPHRFHHGPPQRQTALFKFVRQSGDLLPPLLYVPYLHMLSALASGTQSARACYEML
HYNGANFSGGSDVNSMSLDHFFSSCHRYYEHLHQDKPLHDITNPFMMSQSQFGSQSGHPP
RNRSITPKEVEGLRAVMKLLTQIIKYDNIACINIYENQQWLACGVLYGLLQCPVPVTLKG
DVLGVLTQLSRIPEIASGILQITESAQILVTTGDCSPGSSGVSLELEQIESREEEYPMTR
SFVNLLTAMAHSGANLSVIGEGVRAPGFDPYLTFTVESVFLKFSTRAYGRKEEKWEVASS
CLKLFNKLITTYQPHPDHFNVNKTGLPADVMLDRTQLMHDAGPFSKIRPPAFHLLLYVYN
QGNFFKTVSQF
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atggagttaaataactggagtccattcaaggacttgtttacagcaagtcaggactttgct
ttgcgtaactcacaagcttcaacccatctgctaagatccttactaagaaagcataaacct
gagctgctatccttgctgaaaaactcgcctcaaaatgccacccatcgagaaaagctaaaa
aacagccactcagtggggctagtgatcaacgagaatgaatctcccaaagtttttgagcaa
acctttatcgacgaagcaataattatcagtgatatgtttaaactaaatgaattggctgct
gtggatttgttattaacaggagagcaacaaacgccaaactatcctaattattcccgtggt
ctagttgctgttctcttgtactgggatggccgtcgtaaccttgcaagctcacttcggaca
ttagttcagtgtcgtcgtggtgcaacatggaccttggatatctcccctgaaggcacatct
atggtaacttcattttctgacgagttgctaagcaacggtatgactcagcaaattttgaaa
ctactccgtgaaataaaagtggaagctgagatggaaaagttggcgagtcaacgtggtttg
ggtgattcaaaacatagaaagcaggtgcgcgatttgatcactgaagttcggcaatgctta
gctgaaaccctcttctactttgctggccaatcaaggttgccactcaatgatataactgcg
atgatacattaccttgaaacagatggggaggtagaatcagatgggaagctctctctcccc
actcttgctgtgctgtttgctgttctttatgctatttcactcccctatgatttgaataca
atccaagatgaaagcactgttgaggaacttcttcaacatccactgataaccgatgcatca
tatttatccggtattcacaaagtgctggccaaagaaagcaatcacccaagttcttggaaa
gtatcgggtgttcggtcatgcttgcagttagcatggtcggtcacgcttcgattgctcgct
caaattccctcctcgctgctcagtggcattaccccaccaagtggtgaaatacttgagcaa
gacgaactggtcgtggagatggctctcgctgatcgtgtgttcttgtttataaaggaaaac
attgtgttatgcccgagtttccactcagaagaattttatcttcgtagaatccatggcatc
ataactgatcttattgttaatatgacacttaaggtaaaggagatgcgtaaccatggtgac
gaggtggcgaggatactcatgctccacctggcacaaggtgaagaacctccaccttcgtta
aggaaagatttccaccagttgttggaactgatcactgcgttgtatgaagatgatccttta
tcacttgaattatgctccgagtactggtgcacagcagacacatctatgatggatgcgggc
tcctacatcatctcccctcatcgatttcatcatggtcctcctcagagacaaactgctttg
tttaagttcgtccgccagtcaggagatctcttgccccccttactatatgttccatacctt
catatgttatctgcattggccagtggaacacaaagtgcccgtgcatgttatgagatgcta
cattacaatggtgcaaacttcagtggtggtagtgatgtaaattcaatgtcacttgatcac
ttcttctcatcttgtcatcgatattatgaacatctacatcaggataaaccactccatgac
atcacaaacccatttatgatgtcacagtctcaatttggatctcagagtgggcaccctcct
cgaaacagaagcatcacacccaaagaagtggaaggattgagagctgtcatgaagttgctt
acacagatcattaaatacgacaacattgcatgcatcaacatatatgagaaccaacagtgg
ttagcatgcggggtgttgtatgggttgctacaatgcccagtgcctgtcacactgaagggc
gatgtactgggagtcctcactcagctctcgaggatcccagagatcgcatccggcatcctc
cagatcactgagagcgctcaaatcctcgtcactactggagattgctcacctggttcatca
ggtgtatcactagagttggagcagatagaatcacgtgaagaggaatacccgatgacgcgt
tcatttgtgaaccttctcacagccatggctcactctggtgctaatctatcagtcattggt
gagggtgtgcgagctcctggatttgatccatacctcacgttcactgtcgagtcggtcttt
ctcaagttttcaacgcgagcctatggaagaaaggaagaaaaatgggaggttgcatcatct
tgcctcaaattattcaacaagttgatcacgacctatcaacctcaccctgatcatttcaac
gtcaacaaaactggtttgccggctgacgtcatgctcgaccgcacacagctgatgcacgac
gccgggccgttttcaaagatccgaccaccagcgtttcatcttttactttatgtttacaac
cagggaaactttttcaaaaccgtaagtcaattttaa
DBGET
integrated database retrieval system
