Ciona intestinalis (yellow sea squirt): 445640
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Entry
445640 CDS
T01056
Symbol
pf16
Name
(RefSeq) pf16 protein
KO
K25532
sperm-associated antigen 6
Organism
cin
Ciona intestinalis (yellow sea squirt)
Brite
KEGG Orthology (KO) [BR:
cin00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cin03037
]
445640 (pf16)
Cilium and associated proteins [BR:
cin03037
]
Motile cilia and associated proteins
Sperm associated proteins
445640 (pf16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
Cnd1
HEAT_2
HEAT_EZ
DNA_alkylation
Adaptin_N
TOR1L1_N
Proteasom_PSMB
GNC1_N
RTP1_C1
Mo25
API5
Motif
Other DBs
NCBI-GeneID:
445640
NCBI-ProteinID:
NP_001027638
Ensembl:
ENSCING00000003456
UniProt:
Q8T892
LinkDB
All DBs
Position
9:618106..623773
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AA seq
476 aa
AA seq
DB search
MSQRQVLQVFEQYQKSRTQFVQTIAELSTRPQNIETLQNAGVMSLLRPLLLDVVPTVQQT
AALALGRLANYNDDLAEAVVKGDILPQLVYSLAEQNRFYKKAAAFVLRAVAKHSPQLAQS
VVDCGALDALVICLEEFDPGVKESAAWALGYIARHNAELSQAVVDAGAVPLLVLCIQEPE
LSLKRISASALSDVCKHSPELAQTVVDAGAIAHLAQMILNPDAKLKRQVFSALSQISKHS
VDLSEMVVEAEIFPAVLTCLRDPDEYVRKNVATLIREIAKHTPELAQLIVNAGGVAAIVD
YVGESKGNVRLPGVMTLGYIAAHSDNLAMAVIVSKGVNQLAITLAEESEDHIKAAVGWSL
GQIGRHTPEHAKAVAVANVLPRLLQLYLAASSSEDLQIKSKKALKNILQKCVHLQALEPL
LHDAPANVLKHVVGQYSKVLPHDSKARRIFVTSGGLKKVQEIKCDPGSALHEYISS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgagccaacggcaagttttacaagtgtttgagcaataccagaagtccagaactcaattc
gttcaaacaatagcagagttgtccaccagacctcagaatattgaaactttacaaaatgca
ggtgttatgtcattattgagaccacttctccttgacgtggtaccaactgtacaacaaaca
gcagccctcgctttaggacgacttgctaattataatgatgacttggcagaagctgtagtc
aaaggagatattctaccgcaattggtttactcattggccgaacaaaatagattctacaag
aaagctgccgcgtttgttcttcgagctgtagccaaacactccccacaacttgcgcaatcg
gtggttgattgtggagccctggatgccttggttatctgtcttgaagagtttgatcccggt
gtaaaggaatcagcagcatgggcacttggttacattgcgcgtcataatgcagaattatca
caagctgttgtggacgccggggccgttcctttgcttgtgctttgtattcaagaaccagag
ttatccttgaaaagaatctcagcgtcagctcttagtgacgtgtgcaaacatagtccggag
cttgcacaaactgttgtggatgcgggagccatcgcacatcttgcccagatgattcttaac
cctgatgctaaacttaagcgtcaagtgttctcagcattgagccaaatctcgaagcattca
gtggatctgtcagagatggtggttgaagccgagatcttcccagccgtccttacttgtctc
agggatccagatgaatatgtgaggaagaatgtcgccactttgatcagggagatcgccaaa
catacaccagagcttgcacagctcatagtaaatgctggtggagtggcagccattgtagat
tacgttggtgaatcgaagggaaatgttcgtctacctggtgtcatgacacttggttacatt
gctgctcactcagataacttggctatggctgttattgtttcaaagggagtaaatcaactt
gctataactcttgctgaagagagcgaggatcacattaaggccgctgttggttggtccttg
ggacaaataggtcgtcatacccctgagcatgcaaaggcagttgctgtggctaatgttttg
cctagacttctacaactttacttggctgcaagtagctccgaagatctccaaattaagtcc
aagaaagccttgaagaacattcttcaaaaatgcgttcatcttcaagcacttgagccacta
ttacacgacgctcctgctaatgtattgaaacatgttgttgggcaatacagcaaggtactt
ccccatgacagcaaggctcgccgtatcttcgttacaagcggtggtctcaagaaggtccaa
gaaatcaaatgtgaccctggctctgcacttcatgaatatatcagctcttaa
DBGET
integrated database retrieval system
