Chelonus insularis: 118071944
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Entry
118071944 CDS
T08669
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
cins
Chelonus insularis
Pathway
cins03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cins00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118071944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cins03019
]
118071944
Messenger RNA biogenesis [BR:
cins03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
118071944
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
118071944
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
DDHD
TFIIA
Velvet
DUF4770
EPL1
Motif
Other DBs
NCBI-GeneID:
118071944
NCBI-ProteinID:
XP_034947339
LinkDB
All DBs
Position
Unknown
AA seq
2428 aa
AA seq
DB search
MNLDSLSFTLSQIDYLTSNLNKENYQANLEEISVLVRWKGLEADKHLLRCLFSLINFSTE
ETPNFSSRDYYQVQYFKKIFVDLLDKPSLVILLTYAIDHPLNQQKALEPSPNFFLQLKRV
FELTLLQEIVFSLALRQSENKEIRTLALENIRKKLPDLVKNYINSDTNSKNKAGGIHISS
PQVLHYILSETLNNLQKFEISFELKEQFLKHLRHNFPRKLAPVVLAPLLYPESDKNILDH
STMANNQMDPNSFVEFVMELGPTFTNNVDECKSTLTGLGTREISPLTVARILSHMARACN
SIEENFWGNSSNNSETNKDKTSDGNSLNNWNVEVFVQALKEIQSTLSWNEVIVKLDHTDF
HIKDRQSLNLLITGLRLGLQHQGYPLDVFPVELFYRHWDNFEGQFSLIQQILKNPDIFCF
ADYPYHSVTIDGLKAAPESDSKEAQTWRSLNVVELLLHLAERGLYGQVQEIFKWPIQHCP
DVLVLALLQINPPITILRQELLGTLMPIFLGNHPNSAVILHHAWHANNVKIKTIIMHSMA
EWYLRGDHDQTRLSRILDVAQDLKALTALLKAQSFPFVIDLACLASRREYLKLEKWFTDK
IRDHGEAFVAASIKFLQRRCPQVMSPGLKEDAMVPKASQLPQETLTTMLACLQVCAGNFS
QECSDAIMTMINNCSMMLNKANINRPPPPGVLRHPVLDPFNQVKLAAPLFSSKSIDTLGN
LSTGLASMNLGSSLGPSSSSAFNLPGALGPLVSTPGSPSRLMGPSPNPFPMLPLSSQLHS
GPVGTQGPAVIPGTATIGGVGRLGPPTGLEKTRLPETSSLFPDMAQNVSKEIEDEANSYF
MGIYNHSPHQTLSIDEVLDILKKFQDSDSKREREVFNCILRNLFEEYRFFPQYPEKELHI
TAQLFGGIIERGLVNSYMTLGLALRFVLDALRKPEGSKMYYFGIAALDRFKGRLKEYQTY
CEHVRAIQHFSEFPAHLMEYVEYGLQGQEPPTRPQGPVLPKSLAVLNPTTAWKTITTTTI
TTSTTQVKPSTTSTTSLSARPSIANATNIDTLLVATDKEEKITSPPEALQDKTAFIFNNL
SQLNLQQKCDEIKDIVTEEYWPWMAQYLVMKRASIELNFHVLYSNFLDCLKVPDVNKMVT
RETFRNIKVLLRSDKGIANFSDRSLLKNLGHWLGMLTLGRNKPILQVDIDLKSLLVEAYH
KGQQELLYVVPFVAKVLESCAKSRVFRPPNPWTMAIMNVLAELHQEPDLKLNLKFEIEVL
CKNLSIDVAELKPAVYLKDPEKLRNLEYQLSHPNKKSESANSQQQQQQQQQQQQQQQQQQ
QQQQQQQQQQQQQQQQQQQGPVEELVGTTTPGTIVSQQTQPINTTPSLPTGPPEPRFNYT
DISVTGVANIAQHITINNQLTLLQTHPYLKQFIRPAVERAIQEWIHPVVDRSIKIALTTS
EQIVRKDFALDPDENRMRTAARQMVRNLTAGMAMITCRDQILASISSNLKNAFLTAMMGS
TPQQKELAEQAANIVAADNMELACAFVQKTAIEKAMPEMDKRLLNEIELRKIARTEGRRY
FDPVVKYQAERMPEQIRLKAGGVTPQQMTVYEEFARNIPGFLPLSERETQALFIPKPIIE
PTVTAFATNPAVAVPTAQQVAVYAAAAVNNDEVGSMLEKFVNEVEVLLTAMGPAAPHPQH
AALHSLIESIILTRRSRDAGAAMALLKKAVESLLDGPTISSGVTDSEIVLRYRELHLRIL
KCLQDPRAYGMQWTNKHVTRCWAECRDEFRYNFEAVDCLIRSHLISFPQFDVALAQAMDV
GNAMATAFAMQLVQLYLIDERQTTHVTESDLFHTVEILAKMAHHRAPPDGIPLFRLTSLM
ESLRANHDPGVLADRAPAGPTAHIHSGILQVRARDFDDPPGLMEKTEYLLREWVTMHHSP
NHARDPTKAFGMFVHQMNIHGILKTDDLITRFFKLSTQMCVDLCYRALAESNAAPSAVRA
KCFLTLDAFVRLVALLVKHSGDSTNTSTKINLLNKVLGIVAGVLLQDHEMRGTDFQQLPY
HRIFIMLFLELCAPEPVLEAVNYQVLTAFCHTLHILRPAKASGFCYAWLELVSHRVFIGR
MLAITPQQKCWGMYAQLLIDLFKYLAPYLRNAELAKPVLVLYKGTLRVLLVLLHDFPEFL
CDYHYGFCDAIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDMLQEIAHAPRVLTNFVS
MIQPVNFKKELDSYLKARAPVTFLSELRSSLQQVSQEAGVRYNIQLMNALVLYVGTQAIA
FIRNKGHTPSMTTIAHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTL
LYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPTYKFWTHEFVHCAPE
IEKLFESVARSCMVQKQVQPTPEPEIPE
NT seq
7287 nt
NT seq
+upstream
nt +downstream
nt
atgaacctagattcattatcttttactttatcacaaattgattatcttacttctaattta
aataaggaaaattatcaagcaaatcttgaagaaatttcagttttagtgcggtggaaaggc
ctagaagcggacaaacacttgctccgttgtttgttttcccttatcaactttagtacagaa
gaaactccaaattttagctccagagattattaccaagtccaatattttaagaaaattttc
gtggatcttttggacaaaccgtcattggtgattctcttaacctacgctattgaccatccc
ctcaatcagcagaaggcactcgaaccatcgccaaatttttttttacaattaaaacgtgta
tttgagttaactttacttcaagaaattgtgttttctcttgctttaagacaatctgaaaat
aaagaaataagaacattagcattagaaaatataagaaaaaaactacctgacttagtgaaa
aattatatcaactcagacactaatagtaaaaacaaagcaggaggtattcatatttcatca
cctcaagttttacattacattctcagtgaaactttgaataatttacagaaatttgaaatt
tcatttgaattaaaagaacaatttctcaaacatttgagacacaattttccccgaaaatta
gcaccagtggtgcttgcaccactattatatcctgaaagtgataaaaatatattagaccat
tcaaccatggctaataatcaaatggatccaaactcttttgtagagtttgtgatggagcta
ggacccacatttacaaacaatgtggatgaatgcaaatcaactttaacaggtttagggact
cgagagatctcacctttgactgtagctcgaattctttctcacatggctcgtgcctgtaat
agtatagaagaaaatttttggggaaattcatcaaataactctgaaactaacaaagacaaa
acttctgatggaaattcactcaataattggaatgttgaagtattcgtacaagctttaaag
gagatacaatcaactttgtcttggaacgaagttatagtaaagttagaccacacggatttc
catattaaagatcgtcaaagtttaaatctattgataactggtttaagacttggtttacaa
catcagggttatcctttagacgtatttccagtggaattattttatcgtcattgggataac
tttgaaggacaattttctctcattcaacaaattttaaaaaatccagacatcttttgcttt
gctgattatccatatcattcagtgacaatagatggtttgaaagcagcacctgaaagtgat
agtaaagaagcacaaacttggcggtcattaaatgtcgtagaactcttattacatttggca
gagagaggactttatggacaagttcaagaaatattcaaatggcctattcaacactgtcca
gacgttcttgtacttgcattactccagataaatccaccaattacaattcttcgtcaagaa
ttgttaggtactctcatgcctatattccttggaaatcatccaaattcagcagtaatcctt
catcatgcctggcatgctaataatgtaaaaataaagacaataattatgcactcaatggca
gagtggtatcttcgaggagatcatgatcaaactcggttatcacgtattttagatgttgca
caagatcttaaagctctcactgcactcttaaaggctcagtcttttccatttgttattgat
ctcgcatgcttggcatcgcgacgtgaatatttaaagcttgaaaaatggttcactgataag
attcgtgatcatggtgaagcatttgtagctgcttcaattaaattcctgcaaagaagatgt
cctcaagtaatgagtccaggacttaaagaagatgcaatggttccaaaagctagtcaactg
cctcaagaaacattgacaactatgttagcttgtttacaagtttgtgcaggaaatttttct
caagagtgttccgatgctataatgacaatgattaataattgtagtatgatgttgaacaaa
gctaatataaatagacctcctcctccaggagtcctcagacatccagttttagatccattt
aatcaagtgaaattggctgcacctttattttcatcaaaatccattgacactttaggaaat
ttaagtacaggcctggcttcaatgaatcttggatccagtcttggaccatcaagtagttca
gcatttaatcttccaggagcactgggtccattagtatcaacaccaggatcaccatcacgt
ttaatggggccatctccaaatccatttccaatgttaccattgtcttctcaacttcattca
ggaccagttggtactcaaggtcctgcagtgataccaggaacagctacgattggtggtgtt
ggtcgtcttggccctcctacaggcttagaaaaaactcgacttcctgaaacgtccagtcta
tttcctgacatggctcaaaatgtatcaaaagaaattgaggatgaagctaatagttatttt
atgggaatatataatcattctcctcatcaaactctatcgattgacgaagtacttgatatc
ttaaaaaagtttcaagattcagatagcaaacgagaacgtgaagtatttaattgtatttta
cgtaatctatttgaagaatatagattttttcctcaatatcctgaaaaagaacttcatatt
acggctcaattgtttggaggaattattgagcgtggtttagtaaacagttatatgactctt
ggacttgctttgagatttgttttagatgctttacgcaagccagaaggtagtaaaatgtac
tattttggtattgctgctcttgatagatttaaaggtagattgaaggagtatcaaacttat
tgtgaacacgtaagagctattcaacattttagtgaatttcctgctcatttaatggaatat
gttgaatatggattacaaggacaagaaccaccaacacgacctcaaggacctgtgcttcct
aaatcattggctgtattaaatcctacgactgcttggaaaactatcacaacaacgaccatt
acaacgagtacaacgcaagtcaaaccgtcaacaacttcgacaacatcattgtcagctaga
ccatcgattgctaatgcaaccaatatcgatactcttttagtagctactgacaaagaagaa
aaaataacatcgccacctgaagcattacaagataaaactgcttttatttttaataatctc
agtcaacttaacttgcagcaaaaatgtgatgaaattaaagacattgtaactgaagaatac
tggccatggatggctcaatatttagtgatgaaacgtgcgagtatagaattgaattttcat
gttctttattcgaatttcctcgattgtcttaaagtaccagatgtaaataaaatggttacc
agagaaacttttagaaatatcaaagtcttactacgaagtgacaaaggaatagccaatttt
tctgatcgttctctactgaaaaacttgggtcactggctaggaatgttaacactaggaaga
aataaacccattttacaagtagatattgatttaaaaagtttactcgttgaagcctatcac
aaaggacaacaagaacttctttatgtagttccatttgtagctaaagttcttgaaagttgt
gctaaaagtcgtgtttttcgtcctccaaatccatggaccatggctataatgaatgtactg
gctgaattacatcaagaaccagatttaaaactaaatcttaaatttgaaattgaagtgtta
tgtaaaaatttgagtattgacgtagctgaattaaaaccggccgtctatctaaaagatcca
gaaaaattgagaaatttggagtatcaattatctcatccaaataaaaaatctgaatcggcc
aatagtcaacagcagcagcagcaacaacaacagcagcagcagcaacaacaacaacaacag
cagcagcagcagcagcaacagcaacagcagcagcaacaacaacaacagcaacaacagggt
ccagtggaagaacttgttggaactacaactcctggaactattgtatctcaacaaacacaa
cccattaatactactccatcattacctacaggtcctccagaaccaagatttaactataca
gacattagtgtaacaggtgttgctaatattgctcagcatattacaattaataaccagtta
acactgcttcaaactcatccatacttgaaacaatttattagacctgcagtggaacgagct
atacaagaatggatccatcctgtcgttgatagatcaataaaaatagctttaacaactagt
gaacaaattgtccgtaaagattttgctttagatcctgatgaaaatcgtatgagaacagca
gcaagacaaatggttcgtaacttgaccgcaggaatggcaatgatcacatgtagagatcaa
attttagcttcaattagtagtaatttgaaaaatgcatttttaacagcaatgatgggatca
actccacagcaaaaagaacttgctgaacaggctgcaaatatagtagcagctgataatatg
gaattggcatgtgcttttgttcaaaaaactgctattgaaaaggctatgcctgaaatggat
aaaagattattaaatgaaatagaacttagaaaaattgctcgtactgaaggaagacgttac
tttgatccagtagttaagtatcaggcagaacgaatgccagaacaaattcgattaaaagct
ggaggtgtgactcctcaacaaatgacagtttatgaagaatttgcaagaaatatacctgga
tttttaccgctatctgaaagagaaactcaagctctttttatccctaaaccaatcatagaa
cctactgttactgcatttgctactaatcctgcagtagctgtacctactgcacaacaagtg
gctgtttatgctgctgctgcagttaataatgatgaagtaggaagtatgttagaaaaattt
gtaaatgaagttgaagtattattaactgctatgggacctgctgctccacatcctcaacat
gctgcacttcacagccttatagaatcaattattcttactagacgatcacgagatgctggt
gctgcaatggcattactgaaaaaagctgttgaaagtttattagatggtccaactatatct
agtggagtaactgattcagaaattgtcttacgttatcgagaacttcacttaagaatttta
aaatgtcttcaagatccaagagcttatggtatgcaatggacaaataaacatgtaactcgt
tgttgggcagaatgtagagatgaatttagatacaattttgaggctgttgattgtctaata
agatcacatcttattagttttccgcaatttgatgttgctctagctcaagctatggatgtt
ggaaatgcaatggctacagcatttgcaatgcaactagtacagttgtatttaattgatgaa
agacaaactactcatgttactgaatctgacttattccatactgttgaaatccttgctaaa
atggctcatcatcgagcaccacctgatggaattcctttattccgacttacatcattaatg
gaatcccttcgtgctaatcatgatccaggagtacttgctgatcgtgcaccagctggtcca
acagctcatattcattctggaattctccaggtgcgagctcgtgactttgacgaccctcca
ggtttaatggaaaagacagaatatttattgagagagtgggtaacaatgcatcacagtcca
aatcatgctcgtgatcccaccaaagcatttggaatgttcgttcatcaaatgaacattcat
ggtattctgaaaactgatgatttaattacgagattcttcaaattaagcactcaaatgtgt
gttgatctctgttatcgtgcattagctgaatctaatgcagctccatcagccgtacgtgcc
aaatgtttcttaactcttgatgcttttgttcgcctagtggcattgctggtcaaacactct
ggtgattcaacaaatacttcaacaaaaataaatttactaaacaaagttcttggaatcgta
gctggagtattacttcaagatcatgaaatgcgaggaactgatttccaacaattaccatac
catcgtattttcattatgttatttttggaattatgtgcacctgaacccgtcctagaggct
gtaaattatcaagtgttaacagctttctgtcacactcttcacattttacgtccagcaaaa
gcatctggattttgttatgcttggttagaacttgtttctcatagagtttttattggacga
atgctagctattactcctcaacaaaaatgttggggaatgtatgctcagctattgattgat
ctttttaaatatctagcaccatatcttcgtaatgccgaactagcaaaacctgttcttgta
ttgtacaaaggaactcttcgtgttcttctggtacttcttcatgattttccagaattccta
tgtgattatcattatggattttgcgatgctataccaccaaactgcatacaaatgagaaat
ttaattcttagtgcttttccaagaaatatgagactgccggatccttttacgccaaatttg
aaagtcgatatgcttcaagaaatagctcatgctcctcgtgtacttactaattttgtttca
atgatccaaccggtgaacttcaaaaaggaattggattcatatctgaaagctagagcacct
gtcactttcctttctgagctcagaagtagtttgcaacaagtatctcaggaagctggagtg
cgttacaacattcaattaatgaatgctctagtactctacgtaggaactcaagctatagct
tttatacgtaataaaggtcacacacctagtatgacaacaatagcacattctgctcatatg
gacattttccaaaatctagcagttgatcttgatactgaaggacgttatttatttttgaat
gcaatcgcaaatcaattacgttatccaaatagccatactcattacttcagttgtacttta
ctttatctttttgctgaagctaacactgaagctattcaagaacaaatcactcgagtatta
cttgaacgacttatcgttaatagaccacacccttggggtctgttgattacatttattgaa
ctcatcaaaaatcctacttataaattttggactcatgaatttgtccactgtgctcctgaa
atcgaaaagctctttgaatcagtagccagatcatgtatggtccaaaaacaagtacagcca
acacccgagccagaaataccagagtga
DBGET
integrated database retrieval system
