Citrus sinensis (Valencia orange): 102612467
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Entry
102612467 CDS
T02983
Name
(RefSeq) probable pectate lyase 18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102612467
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102612467
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102612467
NCBI-ProteinID:
XP_006476937
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All DBs
Position
3:complement(join(3898051..3898272,3898430..3898568,3898683..3899423,3899558..3899742))
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AA seq
428 aa
AA seq
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MISPTLSLLLNNKKRKLNRKIRKKMAIPSPSLSIFLLFLMTPALILASAVPDPELVVHEV
HKSINASRRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAVGGRDGRIYV
VTDPGDYDVVNPKPGTLRYAVIQDEPLWIIFARDMTIRLKEELIMNSFKTIDGRGASVHI
AGGPCITIQYVTNIIIHGLNIHDCKKGGNAMVRDSPRHFGWRTVSDGDGVSIFGGTHVWV
DHCSLSNCDDGLVDAIHGSTAITISNNFMTHHDKVMLLGHSDTYTQDKNMQATIAFNHFG
EGLVQRIPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFAAPDRAFSKEVTKHE
DAPESEWRNWNWRSEGDLMVNGAFFTASGAGASSSYARASSLGARPSALVGPITGSAGAL
ICKKGARC
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcccacactctcacttctactcaacaacaagaagaggaaattaaaccggaaa
attagaaaaaaaatggcaatcccttctccttctcttagcatcttcctcctctttctcatg
accccagctctcattttagcttccgcagttccggacccagaattagtcgtacacgaagta
cacaagagcatcaatgcgtctaggaggaacctgggttacttgtcttgcggaaccggcaat
ccgattgacgattgctggcggtgcgaccccaactgggagaagaacaggcaaaggttggcg
gattgtgcgattgggttcggcaagaatgcggttggtggacgtgatggtagaatttatgtg
gtcactgaccccggtgactatgacgtcgtaaaccctaaacccggaactctaaggtacgct
gtgatccaagatgagccgttatggatcattttcgctcgtgatatgaccatcagattgaag
gaagagttgatcatgaactctttcaagaccatcgacggtcggggagccagtgtgcacata
gctggtggtccatgcattaccatacagtacgtgaccaacattattatccatgggttaaac
atacacgactgcaaaaaggggggcaacgctatggtgagggactcaccgagacacttcgga
tggaggacagtatccgacggtgatggtgtctccatattcggtgggacccacgtctgggtt
gatcactgctcgttatcgaactgtgatgatggactggtcgatgccattcatgggtccacg
gctatcactatttcgaacaatttcatgacccaccatgataaggtgatgttattgggtcac
agcgatacctacactcaggacaagaacatgcaagccactattgcctttaatcacttcgga
gaagggcttgtccaaagaattccaagatgcagacatggctacttccatgtggtgaacaat
gactacactcattgggaaatgtatgccattggaggcagtgctaaccctacaatcaacagc
caaggaaatagatttgctgcccctgacagggcgttcagcaaagaagtgacaaaacatgag
gatgcaccagaaagtgaatggaggaattggaactggagatcagagggggacttgatggtg
aacggtgcattttttacagcatcaggagcaggcgcctcatcgagctatgcaagagcttcg
agcctaggtgctagaccatcggcacttgtcggtcccataacgggctctgctggtgcactt
atctgcaagaagggggctcgttgctga
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