Citrus sinensis (Valencia orange): 102614023
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Entry
102614023 CDS
T02983
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102614023
03041 Spliceosome [BR:
cit03041
]
102614023
03036 Chromosome and associated proteins [BR:
cit03036
]
102614023
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102614023
mRNA cycle factors
Common to processing body (P body) and stress granule
102614023
Spliceosome [BR:
cit03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
102614023
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
102614023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
102614023
NCBI-ProteinID:
XP_006492814
LinkDB
All DBs
Position
6:complement(join(19708090..19708596,19708940..19709053,19709230..19709397,19709858..19710100,19711060..19711143,19711218..19711931))
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AA seq
609 aa
AA seq
DB search
MSTSWADSVSASENAAPASSNISALPRPTRSTYVPPHLRNKPPTSSEPPASSRESTEPAS
GPGWGSGSRPDFGRGQGYGSGGRSGGGWNNRSGGWDRREREVNPFGDDVGAEQPVAEEEN
TGINFDAYEDIPVETSGENVPPAVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHAIPISI
GGRDLMACAQTGSGKTAAFCFPIISGIMREQYVQRPRGSRTVYPLALILAPTRELSSQIH
VEAKKFSYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDLLERARVSLQMIRY
LALDEADRMLDMGFEPQIRKIVQQMDMPPPGMRQTMLFSATFPKEIQRLASDFLANYIFL
AVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQVANGVHGKQALTLVFVETKKGADAL
EHWLYTNGFPATTIHGDRTQQERELALRSFKSGKTPILVATDVAARGLDIPHVAHVVNFD
LPNDIDDYVHRIGRTGRAGKSGLATAFFNENNMSLARPLTELMQEANQEVPAWLNRYASR
ANYGGGKSKRSGGNRFGGRDFRRDGSFTRGTSNDYYSGVNSSSSAYGVPGGGYGGGYGYS
NHGATSAWD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgagcacttcatgggctgattcagtgtctgcatctgagaatgcggcccctgcttcttct
aatatcagtgccttacctcgtcccactcgatccacttatgttccgccacatctccgtaac
aagccaccaacctcttctgaacctcctgcttcgtcacgagaatctactgaacctgccagt
ggccccggctggggcagtggttcgaggcccgattttgggcgtggtcagggttacggctct
ggtggtagaagtggcggtggttggaataatagaagtgggggttgggaccgaagggaacgt
gaagtgaacccgtttggtgatgatgttggtgcagagcagccggttgctgaagaagaaaac
acgggtattaattttgatgcttatgaggatattccagtggagacaagtggagaaaatgtg
ccaccggcagttaatacatttgcagaaattgatttgggggaagctttgaatcttaatatt
aggaggtgcaagtatgtcaaaccgacgcctgttcagcgtcatgcgattcctatatcgatt
ggtgggcgagatttaatggcctgtgctcagacagggtcggggaagacagctgccttttgt
tttccaattattagtgggattatgcgtgagcagtacgtacagagaccacgtggatcgcgg
actgtttatcctctggctcttattcttgcccccacaagagaactctcgtctcagatccat
gttgaagccaagaaattttcctatcaaactggtgtcaaggtggtggttgcttacggagga
gcaccaatcaaccaacagttgcgagagcttgagagaggggttgatattcttgtggcaact
ccaggaagattggttgatctgcttgagagagctagagtttcattgcagatgattagatac
ttagctctcgatgaggcagatcggatgctggatatgggttttgagcctcaaatcagaaaa
atagtgcaacaaatggatatgcctccacctggtatgagacagacaatgcttttcagtgcc
accttcccgaaagagatacagagattggcttcggacttcctagcaaattatatttttctg
gctgttggaagggttggttcaagcactgatttaattgttcaaagagttgagttcgttcac
gagtcagacaaaagaagccatctgatggacctcttgcatgcacaggtggcaaatggagtt
catggcaagcaagctttgacattagtttttgttgagacaaagaaaggtgctgacgcattg
gaacactggttgtatacgaatgggtttcctgcaactactattcatggtgacagaacacaa
caggaaagagaactagcattgagatcatttaagagtggaaagacaccaattttagtagct
acagatgtggcagcacgtggtcttgatataccacatgtagctcatgtagtcaactttgat
ctgcccaatgacatcgatgattatgttcatcggataggaaggacaggacgagctgggaaa
tcaggattggccacagccttttttaacgagaacaatatgtccttggcaaggcctctaact
gagctaatgcaagaagctaatcaggaagtacctgcttggcttaatcgttacgcatcacgg
gctaattatggtggtgggaaaagtaagcgttctggaggaaaccgttttggcggccgtgac
ttcagaagagacggctcatttactagaggcacatctaatgactattacagtggggtgaat
agtagtagcagtgcatatggggttcctggtggtggttatggtgggggatatggttacagc
aatcatggtgcgaccagtgcatgggattaa
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