Citrus sinensis (Valencia orange): 102614078
Help
Entry
102614078 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102614078 isoform X1
KO
K19022
AP-5 complex subunit beta-1
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cit03400
]
102614078
DNA repair and recombination proteins [BR:
cit03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
102614078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
102614078
NCBI-ProteinID:
XP_006484635
LinkDB
All DBs
Position
4:complement(join(21952216..21953692,21953897..21954336,21954788..21956242))
Genome browser
AA seq
1123 aa
AA seq
DB search
MTDRASSTSSSSSSSAASKPLTWQDWESLIGDFQHGGARLQRWASEYPTPSLVDLALTSL
LKKDFPLRLALIIFLEEFSLTLFTNPKSLDRLIETLRFVVQSPVDNFHITYALKDQFLIS
TTSILISVDVLKEFEVRYLENVVELLLTIINRPNHGLDRHTRAVACECLRQFEVYCPGLL
SDIAGHLWTLCQSERTHASQSYILLLTNVIYNIVDRKLNVSVLNTSVPLVPFNVPQLALG
SNLVGLNFKELRRAMAFLLEWTQVLTPCGMLEFLRLVLPVAVALELQPSMLKVQFFGMIY
SYDPVLCHAVLMMYLHLFDSFDGQECEIVQRLMLISKETQHHLVFRLLAVHWVLGLLNKL
MSSKEVAKKNSILELGLRFYLSVFDPLALKALKLDLLAFCTIFLDMLKKGGDSIGEVGDG
KSVVKLFEDSLVSVSAFKWLPPSSTETAVAFRTFHKFLIGASSHFDVDPSTTRILMETVI
FHALQEMLVDLTLEFQRLVPVIVVFIDRLLSCQKHRWLGERLLQKIDEHLLPRVTIDYRL
VSYFAIFDRIAENDTIPPHGLLELLTKFMAFLVQKHGPNTGLKSWSQGSRVLGNCRTMLK
YHRSSRLFIGLSRLLAFTCLYFPDLEIRDCARIYLRLLICVPGGKLRDILNLGEQLLGVP
PSQHSTSFFNVQSPRHYQDIKKFKNISSYVHLERAVPLLVKQFWSLSLSTTDNKSGFLDS
IRDTEPPVDEREHDGSIDHQIMSQRETIDQPLEPLQVMDSKISEILGLLRRHFSCIPDFR
HMAGLKVSILCSLRFESEPFNRLWGGDSTMSGIDGVDALPAIYATVLKFSSSAPYGSIPS
CRIPFLLGEPARKGSFSDQTLAVSVIPVENGSRDKESFRALVTIDLEPREPTPGLVDVFI
ETNAENGQIIYGQLHSITVGIEDMFLKAIAPPDITEDEIPGYYSDLFSALWEACGTSSNT
GREIFSLKGGKGVAAIKGIQSVKLLEVPATSVIRATERYLAHFVVSVIGEQLVDIVKDGG
IIRDVIWKDVGSDSFLDCSTSVTDVEQGPLHLTYIGNEDEGEIPVKISKRNMGCFLVLIF
LPPRYHLLFRMEVCDISTLVRIRTDHWPCLAYVDDYLEALFFA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgacggacagagcttcatcaacatcatcatcttcatcatcatcggcagcgtcaaagcca
ctcacatggcaagactgggagagtctgattggcgatttccagcacggcggtgcacggctc
caaagatgggcctccgagtacccaaccccttccctcgtagaccttgccctcacctccctt
ctgaaaaaggacttccctttgaggctcgctctcatcattttcctcgaagaattctccctc
actcttttcaccaatccaaaatccctcgatcgcctcatcgaaacgctgcgtttcgtggtc
caatctcccgtcgataatttccacattacttacgccttaaaagaccagttcttgatctca
acaacttcgattttgatatcagttgatgtgttaaaagaatttgaagttaggtatttggaa
aatgtcgttgaattgttattaactattattaatcggccgaatcacggattagatagacac
actagggctgtagcttgtgagtgcttgcgacagtttgaagtttattgccccggcttgctt
tctgatattgctggtcacttgtggactttgtgtcaaagcgagaggactcatgcttctcag
tcttatatactgttgcttacgaatgttatttataatattgttgataggaagttgaatgtt
tctgttttgaatacttctgtgcctttggttccgtttaatgtgccccagttggctttgggt
tcgaatttggtggggttgaattttaaggagttgaggcgagctatggcttttttgttggag
tggacgcaagtcttgactccttgtggtatgttggagtttttgagattggtattgccagtg
gctgtggctttggagttgcaaccatctatgttgaaggttcagttttttgggatgatttat
tcatatgatcctgtgttgtgtcatgctgttttgatgatgtatttgcacctttttgattca
tttgacgggcaagagtgtgagattgttcaaagacttatgttgatttcaaaggaaacacaa
catcatttggtttttcgtttgcttgctgtgcattgggtgttaggcttattgaataaatta
atgtcgagtaaagaagttgcaaagaagaattctattcttgagttgggtttgaggttttat
cttagtgtctttgacccacttgctttgaaagccttgaagcttgatttgcttgcgttttgc
accatttttcttgatatgttgaaaaaagggggcgattcaattggggaagttggggatgga
aagtctgtggttaagctttttgaagacagtcttgtatctgtttcagcttttaagtggttg
cctccctcaagcactgaaactgcagtggctttccgtacatttcataagtttttgattggt
gcatcatctcattttgacgttgatccttccaccacacgaattctcatggagactgtgatc
ttccatgctttacaggagatgctagtggacctgacattggagtttcagagattagtccca
gtcattgttgtctttattgatcggttgttaagttgtcaaaagcatcgttggttgggagag
cgtttgcttcaaaagattgatgagcatttgcttccaagagtcaccatagattatagatta
gtttcgtacttcgcaatctttgacagaattgctgaaaatgatacaatacctccccatgga
ttgctagagctgcttaccaagtttatggcttttcttgttcagaaacatggccccaatact
ggtctcaaatcttggtctcagggaagcagagtgcttggtaattgccgaactatgctgaag
taccaccgcagttctagattattcattggactgtctcggctgcttgcattcacctgcctt
tatttccctgatttagagatccgtgactgtgcaaggatctacttgcgactgctaatttgt
gtaccaggagggaagctcagagacatactgaatcttggggagcaactgcttggtgttcca
ccatctcagcattccacttcattttttaatgttcagtctcctcgacactatcaagatatc
aagaagttcaagaacatttcatcctatgtccaccttgagcgggcagtaccgctacttgtc
aaacaattttggtccttgtctttatcaaccacagataataaatctggttttctagacagc
atcagggacactgaaccaccagttgatgagagggaacatgatggcagtattgaccatcaa
ataatgtctcaaagagaaacaattgatcaaccacttgaacctttacaggtaatggattca
aagatttcagagatattaggattattaaggaggcatttttcttgtattcctgacttcaga
catatggcagggcttaaagttagtatattgtgtagtttgaggtttgaatctgagcctttc
aaccgcttatggggaggtgattccactatgagcggaatagatggtgtagatgcccttcca
gccatatatgcgactgtgctcaaattttcatcctcagcgccatatggatctattccttca
tgtcgcataccttttcttctaggtgaacctgcaagaaagggttccttttccgatcaaaca
cttgcagtaagtgtaattcctgtagaaaatggttctagagataaggaaagctttcgagct
cttgtaacaattgatttggaacctcgggaaccaacaccaggtcttgttgatgttttcatt
gaaacaaatgcagaaaatggtcaaatcatatatggtcaacttcatagtatcacagtaggc
atagaagacatgtttctcaaggctattgcaccacccgatattacagaagatgaaatacct
ggttattactcagatcttttcagtgctctttgggaggcatgtggcacctcctcgaataca
ggacgggaaatattttccttgaaaggaggcaaaggagtagcggcaatcaaaggaattcag
tcagtcaagttgcttgaagttccagcaacctctgttatcagggcaacagaacgctaccta
gcgcactttgttgtaagtgtgattggtgaacaacttgttgacattgtaaaggatggtgga
ataattagggacgtcatttggaaagatgtaggttcggattcttttcttgattgcagtacg
tcagttactgatgttgagcagggtcctctgcatctcacatatattggcaatgaggacgag
ggagaaattccagtcaaaatcagtaaaagaaatatgggttgctttcttgtattgatattt
cttccaccaaggtatcatctccttttccggatggaagtatgcgacatttcaactttagtt
cgaattagaactgatcactggccttgcttagcatatgttgacgattatttggaagcatta
ttttttgcatag
DBGET
integrated database retrieval system
