KEGG   Citrus sinensis (Valencia orange): 102617436
Entry
102617436         CDS       T02983                                 
Name
(RefSeq) splicing factor SF3a60 homolog isoform X2
  KO
K12827  splicing factor 3A subunit 3
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102617436
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cit03041]
    102617436
Spliceosome [BR:cit03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    102617436
 Complex B
    102617436
 Complex C
   U2 SnRNP specific factors
    102617436
SSDB
Motif
Pfam: SF3a60_Prp9_C SDE2_2C SF3A3 SF3a60_bindingd LLPH Desulfoferrod_N
Other DBs
NCBI-GeneID: 102617436
NCBI-ProteinID: XP_006490497
UniProt: A0A067DVA8
LinkDB
Position
9:complement(join(839028..839174,839427..839573,840004..840132,840658..840735,840936..841094,841518..841589,842435..842599,842823..842919,843028..843170,843442..843549,843728..843841,843930..844103))
AA seq 510 aa
MSSTLLEVTRAAHEEVERLERLVVKDLQTEPNSNKDRLVQSHRVRNMIDTITDTTERLIE
IYADKDNARKDEIAALGGQTATGTNVFSSFYDRLKEIREYHRRHPSARVAVDASEDYENL
LKEEPLVEFSGEEAYGRYLDLHELYNQYINSKFGKEIEYSAYLDVFSRPHEIPRKLKMTR
QYREYIEKLLEYLIYFFQRTEPLQDLDRIFSKVVADFEEQWVTSTLQGWETEGQENGHVP
AQHSELDLDYYSTVEELMEVGSERLKEELAAKGLKSGGTLQQRAERLFLTKHTPLDKLDK
KHFAKGARGKEQNGVAPATQEVGNLKDIALMEAKMKKLCDLLSETIERTIQNVQKKQALT
YEEMEAEREEEETQVDTESDDEEQQIYNPLKLPMGWDGKPIPYWLYKLHGLGQEFKCEIC
GNYSYWGRRAFERHFKEWRHQHGMRCLGIPNTKNFNEITSIEEAKELWKKIQERQGGIKW
RPELEEEYEDKEGNIYNKKTYTDLQRQGLI
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgtcgacactgttagaggtgacacgcgcggcccacgaagaagtggagcggctcgag
cggctcgttgtgaaggacctacaaactgagccaaattcgaacaaggatcggctggttcag
agccaccgtgttcgtaacatgatcgacacaatcaccgacacaacggagagactgattgag
atttacgcagataaagacaatgctaggaaagatgaaattgctgctcttggaggccaaact
gctaccggaactaatgtatttagttcattttacgatagattaaaagagattcgtgagtac
catagaaggcacccatctgctcgtgttgctgttgatgctagtgaggattatgaaaatctg
cttaaagaagagcctttggttgagttcagtggagaggaagcctatgggcggtacttagac
ttgcatgaattgtacaatcagtatattaactctaaatttggcaaagaaattgaatattca
gcttaccttgatgttttttcacgaccacatgagatccctcgcaaattgaagatgactagg
caatacagggagtatattgaaaagttactggagtatttaatatacttttttcagcggaca
gagccactccaagatctcgatagaatattctcaaaggttgtggctgattttgaagagcaa
tgggtcactagcactctacagggatgggaaactgagggtcaagaaaatgggcatgttcct
gcacagcatagtgagttagatcttgactattacagcacagttgaagagctaatggaagtg
ggttctgaaaggttaaaggaggaattggctgcaaaaggactaaagagtggtggcaccttg
cagcaacgtgcagagaggcttttccttacaaagcacactcctctagacaagttggacaag
aaacattttgcgaagggcgcacgtggaaaggaacaaaatggagtggctccagcaacccaa
gaagttggcaatttaaaagacattgccctgatggaggctaaaatgaaaaaactttgtgac
ttacttagtgagacaattgagcgaacaatacagaatgtccagaagaaacaggcactgact
tatgaggaaatggaagcagaacgagaagaagaggagacacaagttgacactgaaagtgac
gatgaagagcagcagatttacaatcccctcaaattgccaatgggttgggatgggaagcct
ataccctactggctatacaagcttcatggtcttggtcaggagtttaagtgtgagatatgc
ggaaactacagctattggggccgtagggcgtttgagcggcattttaaggaatggcgccat
cagcatgggatgcgttgccttggtattccaaacaccaaaaacttcaatgagatcacatca
attgaggaagccaaagaactgtggaagaagatacaagaaaggcaaggagggatcaagtgg
cgcccagagcttgaagaagaatatgaagacaaagagggtaacatctacaataagaaaaca
tataccgacttgcagcgccaaggactgatttaa

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