Citrus sinensis (Valencia orange): 102617495
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Entry
102617495 CDS
T02983
Name
(RefSeq) DNA topoisomerase 6 subunit A
KO
K10878
meiotic recombination protein SPO11
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cit03036
]
102617495
Chromosome and associated proteins [BR:
cit03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
102617495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
Topo_VI_alpha
Motif
Other DBs
NCBI-GeneID:
102617495
NCBI-ProteinID:
XP_006480568
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All DBs
Position
6:complement(12128530..12129837)
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AA seq
435 aa
AA seq
DB search
MADKKLKQKRRRPDPTSDDESELPFKNILKPDQAILETLKQLFLAATTTTTAAANGASTS
SSSSKPLTLSDLSLSATCREVTDLSLSAVQSTIETLILQIARSILAGNGFSFQVPSRASS
NQLYVPELDRIVLKDKTTLRPFASLSTVRKSTITVKILSLIHQLCLRNIHVTKRDLFYTD
VKLFQDQTQSDAVLDDVACILGCTRSSLNVIAAEKGVVVGRLTFSDNGDMIDCTKMGMGG
KAIPPNIDRVGDMKSDAMFILLVEKDAAYIRLAEDRFYNRFPCIIVTAKGQPDVATRLFL
RKMKMELKLPVLALVDSDPYGLKILSVYGCGSKNMSYDSANLTTPDIKWLGIRPSDLDKY
KIPEQCRLPMTEQDIKTGKDLLEEDFVKKNPGWVEELNLMVKTKQKAEIQALSSFGFQYL
SEVYLPLKLQQKDWL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaagaaactgaaacaaaaacgtcggcggcccgacccgacatcagatgacgaa
tccgaactccccttcaagaatatccttaaacccgaccaagcaattctcgaaacccttaag
caactcttcttagccgccaccaccacaaccaccgccgcagccaacggcgcttcaacttcc
tcctcgtcatcaaaacccctaactctatcagacctcagtctctctgccacgtgtcgcgaa
gtcaccgacctttcactctccgccgtccaatcaaccatcgaaaccctaatcctccaaata
gcccgctccatactcgccggcaacggcttcagtttccaagtcccctcacgcgcctcctcc
aaccaactctacgtccccgaactcgaccgcatcgtgctaaaagacaaaactaccctccgc
cctttcgcgagcctgtcgaccgtacgcaaatccaccatcaccgtcaaaatcctctcgctc
atccaccagctctgcttgagaaacatccacgtcaccaaacgagacctgttctacactgac
gtcaaactcttccaagaccagacccaatccgacgccgttttggacgacgtcgcttgcatt
ctaggctgcacgcggtccagcctcaacgtgatcgccgccgaaaagggtgtcgtcgtcgga
agactgactttcagcgacaatggcgacatgattgattgcactaaaatgggtatgggcggg
aaagcgattccgccaaatattgatcgagttggtgacatgaaaagcgatgccatgttcata
cttttggttgaaaaggatgccgcttacattagattagctgaagatagattttacaatcga
tttccttgtataattgtgacggcgaaaggccagcctgatgtagctactaggttgtttttg
aggaagatgaagatggagttgaagttaccagttttggccttagttgatagtgatccttat
ggattgaaaattttgtcagtgtatggatgtgggtcgaagaatatgtcttatgacagtgct
aatttgaccacaccggatattaagtggttggggatcaggccgagtgatttggataagtat
aagataccggagcagtgtaggttgccaatgacagagcaagatattaagacggggaaggat
ttgttggaggaggattttgtgaagaaaaacccgggttgggttgaggagttgaatctgatg
gtgaagaccaagcagaaggctgaaattcaggcgttgagctcgtttgggttccagtatttg
tctgaggtttatttgcctttaaagctgcagcagaaagattggctgtaa
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