Citrus sinensis (Valencia orange): 102617640
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Entry
102617640 CDS
T02983
Name
(RefSeq) uncharacterized protein LOC102617640 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102617640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cit03041
]
102617640
Spliceosome [BR:
cit03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
102617640
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
102617640
NCBI-ProteinID:
XP_015389813
LinkDB
All DBs
Position
9:complement(join(10410814..10410907,10410996..10411167,10411305..10411476,10411894..10412094,10412186..10412353,10412420..10412605,10413660..10413744,10413917..10414161,10414383..10414724))
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AA seq
554 aa
AA seq
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MTKKRKNNGSADEDRHVKSVKVVEQSSPSPPRLGFENPLLPLANTYDDDDEEEEYGGRGD
SGAKVGQNGRTGEDDDEDKDEDEDDLANGYGQGQRSRLVEVRRDCPYLDTVNRQVLDFDF
EKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDGYE
INDPSLDDIRHVLNPRFTKEQVDQLDKNKLWSRALDGSDYLPGMVGLNNIKETDFVNVTI
QSLMRVTPLRNFFLIPENYRHCKSPLVHRFGELTRKIWHARNFKGQVSPHEFLQAVMKAS
KKRFRIGVQSNPVEFMSWLLNTLHSDLRNTKKNTSIIYECFQGELEVVKEIPKNTISGND
QNTEKGSDGGDDHDNITTETSRMPFLMLGLDLPPPPLFKDVMEKNIIPQVPLFNILKKFD
GETVTEVVRPHVARMRYRVTRLPKYMILHMRRFTKNNFFVEKNPTLVNFPVKNLELKDYI
PLPTPKENEKLRSKYDLIANIVHDGKPEGGFYRVFVQRKSEELWYEMQDLHVSETLPQMV
ALSETYMQIYEQQQ
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaagaggaaaaataatggtagtgctgatgaagacaggcacgtgaagagtgtg
aaagtggtggagcagtcgtctccgtcacctcctcgtttgggttttgagaaccctcttttg
ccgttagctaatacatatgatgatgacgatgaggaggaggaatatggtggccgaggagat
agtggagcaaaagttggacaaaatggtcgtacgggtgaagatgatgatgaagataaggat
gaggatgaggatgacttggctaatggatatggtcaagggcagcgaagcagacttgttgaa
gtgcggagggattgcccttatcttgatactgttaatcgccaggttttggattttgatttt
gagaagttctgctctgtttctctttcaaacttaaatgtgtatgcgtgtttggtttgtggt
aagtattaccaaggaagagggcagaaatctcatgcatatactcatagcttggaagcagga
caccatgtttacatcaatcttcgaacagagaaagtttattgccttcctgatggttatgaa
attaatgacccttcactggatgatattcggcatgttctaaatccaaggtttaccaaggag
caagtagatcagcttgacaaaaataagctatggtctagggctttggatggttcggactat
cttcctggaatggtgggtctgaataacatcaaggagactgattttgtgaatgtcacaatt
caatctctaatgagagttaccccattaaggaacttcttccttatccctgaaaattaccgg
cactgcaaatctccacttgttcatcgttttggagaacttactaggaagatttggcatgct
cgaaattttaaaggacaggtcagcccacatgagtttctacaagcagttatgaaagccagt
aagaaacggtttcgaataggtgtacagtccaaccctgttgaattcatgtcatggcttctt
aacacactgcattcagatcttagaaatacaaagaaaaatactagcatcatatatgagtgc
tttcagggggagctggaagttgtgaaggagattcctaaaaataccatcagtggtaatgac
cagaatactgaaaaaggttcagatgggggagatgatcatgataacattactacagaaact
tctaggatgccgttcttgatgcttggtctggatttgcccccgccacctcttttcaaagat
gtgatggagaaaaatattataccccaggttccattatttaacatattgaagaagtttgat
ggggaaacagttacagaggttgtccggccacatgtggcaaggatgagataccgcgtcaca
agattaccaaaatacatgatccttcacatgcgacgctttacaaagaataacttctttgtg
gagaagaacccaacattggtcaactttccggtgaaaaatttggaattgaaggactacata
cctttgccaacaccaaaagagaatgagaaactgcgttccaagtatgatctaattgcaaac
atcgttcatgatggtaaacctgagggaggattctacagggtttttgtgcagcggaagtca
gaagaactatggtatgagatgcaggatttgcatgtttcagaaactcttcctcaaatggtc
gctctttcggagacttatatgcagatttacgagcagcagcaatag
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