KEGG   Citrus sinensis (Valencia orange): 102621175
Entry
102621175         CDS       T02983                                 
Name
(RefSeq) nuclear-pore anchor isoform X1
  KO
K09291  nucleoprotein TPR
Organism
cit  Citrus sinensis (Valencia orange)
Pathway
cit03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cit00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102621175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cit03019]
    102621175
Messenger RNA biogenesis [BR:cit03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102621175
SSDB
Motif
Pfam: TPR_MLP1_2
Other DBs
NCBI-GeneID: 102621175
NCBI-ProteinID: XP_052289794
LinkDB
Position
9:complement(join(138060..139363,139437..139614,140055..140159,140327..140455,140554..140627,140756..140843,140951..141004,141088..141243,141779..141850,141926..142075,142199..142271,142487..142605,143126..143179,143252..143410,143630..143722,144403..144519,144909..145011,145091..145275,145369..145443,145528..145605,146254..146292,147152..147199,147350..147529,148158..148211,148309..148350,148451..148549,148627..148761,148863..148965,150121..150194,150291..150331,150983..151061,151168..151281,151420..151524,151610..151753,152282..152350,152447..152550,152874..152922,155048..155140,155222..155342,156487..156596,157129..157209,157397..157486,158622..158687,158783..158875,159043..159171,160162..160260,160369..160515,160620..160925))
AA seq 2059 aa
MPLFVSDEEMSRLSNDAAAVAAKADAYIRYLQTDFETVKARADAAAITAEQTCSLLEQKF
ISLQEEFSKVESQNAQLQKSLDDRVNELAEVQSQKHQLHLQLIGKDGEIERLTMEVAELH
KSRRQLMELVEQKDLQHSEKGATIKAYLDKIINLTDNAAQREARLAETEAELARAQATCT
RLTQGKELIERHNAWLNEELTSKVNSLVELRRTHADLEADMSAKLSDVERQFSECSSSLN
WNKERVRELEIKLSSLQEEFCSSKDAAAANEERFSTELSTVNKLVELYKESSEEWSRKAG
ELEGVIKALEQTQLAQVQNDCKEKLEKEVSAREQLEKEAMDLKEKLEKCEAEIESSRKTN
ELNLLPLSSFSTETWMESFDTNNISEDNRLLVPKIPAGVSGTALAASLLRDGWSLAKIYA
KYQEAVDALRHEQLGRKESEAVLQRVLYELEEKAGIILDERAEYERMVDVYSAINQKLQN
FISEKSSLEKTIQELKADLRMRERDYYLAQKEISDLQKQVTVLLKECRDIQLRCGLSRIE
FDDDAVAIADVELAPESDAEKIISEHLLTFKDINGLVEQNVQLRSLVRNLSDQIESREME
FKDKLELELKKHTDEAASKVAAVLDRAEEQGRMIESLHTSVAMYKRLYEEEHKLHSSHTQ
YIEAAPDGRKDLLLLLEGSQEATKRAQEKMAERVCCLEDDLGKARSEIIALRSERDKLAL
EAEFAREKLDSVMREAEHQKVEVNGVLARNVEFSQLVVDYQRKLRETSESLNAAQELSRK
LAMEVSVLKHEKEMLSNAEQRAYDEVRSLSQRVYRLQASLDTIQNAEEVREEARAAERRK
QEEYIKQVEREWAEAKKELQEERDNVRLLTSDREQTLKNAVKQVEEMGKELATALRAVAS
AETRAAVAETKLSDMEKRIRPLDTKGDEVDDGSRPSDEVQLQVGKEELEKLKEEAQANRE
HMLQYKSIAQVNEAALKEMETVHENFRTRVEGVKKSLEDELHSLRKRVSELERENILKSE
EIASAAGVREDALASAREEITSLKEERSIKISQIVNLEVQVSALKEDLEKEHERRQAAQA
NYERQVILQSETIQELTKTSQALASLQEQASELRKLADALKAENSELKSKWELEKSVLEK
LKNEAEEKYDEVNEQNKILHSRLEALHIQLTEKDGSSVRISSQSTDSNPIGDASLQSVIS
FLRNRKSIAETEVALLTTEKLRLQKQLESALKAAENAQASLTTERANSRAMLLTEEEIKS
LKLQVRELNLLRESNVQLREENKYNFEECQKLREVAQKTKSDCDNLENLLRERQIEIEAC
KKEMEKQRMEKENLEKRVSELLQRCRNIDVEDYDRLKVEVRQMEEKLSGKNAEIEETRNL
LSTKLDTISQLEQELANSRLELSEKEKRLSDISQAEAARKLEMEKQKRISAQLRRKCEML
SKEKEESIKENQSLARQLDDLKQGKKSTGDVTGEQVMKEKEEKDTRIQILERTVERQREE
LKKEKDDNQKEKEKRLKGEKVMLDSAKLADQWKTRISSELEQHKQAVKRLSDELEKLKHT
EAGLPEGTSVVQLLSGTNLDDHASSYFSAVESFERVARSVIVELGTCGPSETSLALDAAA
AAATTGSAVATLAPVTASSAGPGTIHLPVKATDGKERVNLPKTNAETRKPGRRLVRPRLK
RPEESQGDMETSEAEGSNITGKVAASHDAETQGNLALQSQLSARKRPASTTTELREESLS
QGEPSSDVPAPVLKKSKLPDSSSEDAGGQSASPLEDTQPTTEESVEAVGDLAQGSNEEAV
EAEKEEVDNTGEKAEEMKESHQVDTTSEAELQNDKNDVLEENLDRPTGVEMACDDGSKDQ
AEQENQQLTLESESEREEGELLPDVTEVEGAADLSNVVGSPEIGELLPELVSTPVVSPGG
NEDEAPASEEPQEAVNDEGDGTEENAEGLDKSNDGEEADQVPEGSVTTGETASTSSAIEP
DISRQPSSSATTTEAKQASPPASNASHIVNLRERARERAMQRQAGAMPSTVIRGRGRPAG
RGRGVRGGRSGRGQSPAQQ
NT seq 6180 nt   +upstreamnt  +downstreamnt
atgcctttattcgtttccgacgaggagatgtcgcgtctctcaaacgacgccgcagctgtc
gcggccaaggccgacgcctacatacgatacctccagaccgactttgagactgtcaaagca
cgtgccgatgccgccgctatcaccgcagagcaaacttgttctttgctcgaacagaagttc
atttccttacaggaagagttctccaaagttgagtcccagaatgcacaacttcagaagtct
ctcgacgaccgcgttaacgaactcgccgaagttcagtcgcagaagcaccagctccactta
caattgattggtaaggacggtgagatagagaggttaaccatggaggtggcggagctccat
aagtcaaggaggcagttgatggagttggttgagcagaaggatttgcaacatagtgagaag
ggtgctactatcaaggcttatctggataagattatcaacttgactgacaatgctgcacaa
cgggaagcacgtctcgctgaaactgaggctgagttagctcgtgctcaggctacgtgcact
cgtcttacgcaggggaaggagcttattgagaggcataatgcatggcttaatgaggagctg
acttccaaggtcaacagtcttgttgagttgcgtagaacacatgctgatcttgaggcggat
atgtctgccaagctttcagatgttgagaggcagttcagtgaatgctcaagttctttaaat
tggaataaagaaagggtgagggagctagaaataaagctttcatctctacaagaggaattt
tgctcctccaaagatgcagctgcagccaatgaggagagattttccacggagctttcaaca
gtaaataaacttgttgaattatataaagaaagttctgaggaatggtccagaaaggccgga
gagctcgagggtgtgattaaagctctggaacagacccagttggctcaagttcaaaacgat
tgcaaagagaaacttgaaaaggaagtttctgcaagagagcaactggaaaaggaggcgatg
gatttgaaggagaaacttgaaaagtgtgaagctgaaattgaaagtagtcggaaaacaaat
gagctgaaccttctgccactcagcagtttctcaacggaaacatggatggaatcatttgat
accaataacatttctgaagataatcgcttgcttgtgcccaagattccagcgggtgtctca
ggaacagcattagccgcttcacttctgcgtgacggatggagtctagctaaaatttatgca
aagtaccaagaggctgttgatgctcttcgacatgagcaactgggaagaaaagaatctgaa
gcagtattgcaacgagtcctctatgaactagaagagaaagcgggaatcattttggatgaa
agagcggaatatgagaggatggttgacgtttattctgcgatcaaccaaaaattgcagaac
ttcatctcggaaaagtcaagtttagagaaaaccattcaggaattaaaggctgatttgagg
atgcgtgagcgtgattactacctggctcaaaaggagattagtgatcttcagaaacaggtg
acggttcttctcaaagaatgtcgtgatatccagcttcgttgtggattgtccaggattgag
tttgatgatgatgctgtagctattgctgatgtcgagttggctccagagtctgatgcagaa
aaaataatttcagaacaccttttgactttcaaggacataaatggattagtggagcagaat
gtccaacttaggagcctcgtacgcaatctttctgaccagattgagagcagagagatggag
ttcaaggataagttggaattggagcttaaaaaacatacagatgaagctgcctctaaagtt
gccgctgtgttagacagggctgaagagcaaggtcgcatgatcgaatcacttcacacctcg
gttgctatgtataaaaggctatatgaagaggaacataaattgcattcatctcatacgcag
tatatagaggcagctccagatggaagaaaggatctcttgcttcttctcgaaggttcccag
gaagcaactaaaagggcccaagaaaagatggctgagcgtgtctgctgtcttgaagatgat
ttgggaaaggctaggagtgagattatagcactgcgatcagagcgtgataagttggctctg
gaagcggaatttgcaagagaaaagcttgacagtgtaatgagagaagcagaacaccagaaa
gtcgaagtcaatggtgttttggcaagaaacgtggagttttcccaactggttgttgactac
cagcgaaagctgcgtgaaacatcagaatctttgaatgcagctcaggagctctcccggaag
ctagctatggaggtatctgttttaaagcatgaaaaagagatgttgtcaaacgctgaacag
agagcttatgatgaagtccgtagtttgtcacagagagtttatcggttgcaggctagtttg
gacactatccagaatgccgaagaagttcgcgaggaagcaagagctgccgaaaggagaaaa
caagaagagtatataaaacaagttgagagggaatgggctgaggctaagaaagagctgcaa
gaagagcgggataatgttcgattgctcacatctgaccgggaacaaactttaaaaaatgct
gttaagcaggttgaagaaatgggaaaagaattggctactgccttgcgtgcagttgcgtca
gcagagactagagctgctgttgcggagaccaaactttctgatatggagaaaaggattaga
cctttggacacaaagggtgatgaggtggatgatggtagcagaccaagtgatgaggttcaa
ttgcaagtgggaaaagaagagctggaaaaattaaaggaagaagcacaggctaacagggaa
cacatgcttcagtataagagcatagcacaggtgaatgaagctgcattgaaggagatggaa
actgttcatgaaaactttaggactcgggtggaaggggtgaagaaatccttagaagacgaa
cttcattcacttagaaagagggtttctgagctcgaaagggagaatattttgaagtctgag
gaaattgcatctgcagctggagtaagggaagatgcccttgcatctgctcgagaagaaatt
actagcttgaaggaagaaagatcaattaaaatttctcaaattgtgaacttggaagttcaa
gtttctgctttgaaagaagacctggaaaaagagcatgagcgacggcaagctgctcaagcc
aattatgaaagacaggttattttgcagtctgagacaattcaggagctgaccaaaacatca
caagccttggcttcgttgcaagagcaagcatccgaattgcgtaaactggcagatgcattg
aaagctgaaaatagcgaactaaagagtaagtgggagttagagaaatcagttctggagaaa
ttgaagaatgaagctgaagagaaatacgatgaagttaacgaacagaacaaaatactacac
agtcgacttgaggctttgcacattcaattgactgaaaaggatggtagctctgtcaggatt
tcttctcaaagcactgattctaatccaattggtgatgctagtttgcagagtgtgattagt
tttcttcgaaatcgaaaatcaatagctgagacggaggtagctttgttaacgacagaaaag
ctacgcttgcaaaaacaacttgagagtgctcttaaggcagcagagaatgctcaagcgtca
cttactactgagcgtgcaaattcaagagctatgctattgacagaggaagagatcaaatcc
ttaaagctccaggttagggaactaaatttgcttcgcgaaagcaatgtgcagctcagagag
gaaaataagtataattttgaggaatgccagaaattgcgtgaggtagctcaaaagaccaag
tctgattgtgacaatctagagaatctgttgagagagagacaaattgagattgaagcttgt
aagaaagaaatggaaaagcagaggatggagaaggaaaacctggaaaagagggtctctgag
ttacttcagaggtgtagaaacattgatgttgaagactatgatcgcctgaaggttgaagtt
cggcagatggaggaaaaactaagcggcaagaatgccgagatagaggaaacaagaaacctt
ctttctacgaagctggatactatttcacaattggagcaagaacttgcaaacagcagactg
gaactgagtgagaaggagaagaggcttagtgatatttctcaggcggaggctgctaggaag
ttagagatggagaagcaaaagaggatttcagctcaactgaggaggaaatgtgaaatgttg
tcgaaggaaaaggaggaatcaatcaaagaaaatcaatctcttgccagacagttggatgat
ttgaaacagggtaaaaagtctactggtgatgttactggtgagcaagtgatgaaggaaaaa
gaggagaaagatactagaatacagattctagagagaactgttgagagacaaagagaggag
ttgaagaaagagaaggatgacaatcagaaggagaaagaaaagcgcctgaaaggggagaaa
gtaatgttggattctgctaagcttgcggatcagtggaaaacaaggatttcaagcgaactt
gagcagcataagcaggctgtgaaacgcctttcagacgaactagaaaagctcaagcatact
gaagctggtcttccagagggtacctcggttgttcagctcctttctggaacaaatttggat
gatcatgcttcatcctatttttctgctgttgaaagttttgaaagggtggcacgttcagtt
attgtcgaacttggaacttgtggtccttcggagacatctttggccttagatgctgcagca
gcagcagctacaacgggttcagcggttgctactctggcaccggttacggcgtcttcagca
ggacctggaacaattcatttacctgtaaaagcaactgatggaaaagagagagttaatctg
cccaaaaccaatgctgaaactcgtaaacctggacgacgattggttcgtccccgacttaaa
agacctgaagagtcacagggtgatatggagacgtcagaggcagaaggatctaacattaca
gggaaggttgcagcatctcatgatgcagaaactcaaggaaatcttgccctacagagtcaa
ctgtcggcacgtaaacgcccagcttcaaccacaactgagttgcgcgaggaatcactctct
caaggggagcccagttctgatgtcccagcaccagtgctgaagaagtccaagttaccggat
tcctcttcagaagatgcaggaggacaatctgcatctccattggaagatactcaaccaaca
actgaagaatctgttgaagctgttggtgatttagctcaaggttcaaatgaggaagctgtt
gaagctgagaaggaagaggttgacaatacaggagagaaggctgaggagatgaaagaatca
catcaggtagataccacaagtgaagctgaattgcaaaacgataagaatgatgtattggaa
gagaatttggataggccaactggagttgagatggcatgtgatgatggatcaaaggatcag
gctgagcaagagaaccaacagttgacattggaatctgaaagtgagagggaagagggagag
ctgttgccagatgtgacagaggttgaaggggctgctgacctgtcaaatgtggttgggagc
ccagaaattggagaacttctgcctgagcttgtttcaactcccgtggtctcaccaggtggg
aatgaggatgaagctccagcttcagaggaaccccaggaggctgtaaatgatgaaggtgac
ggaactgaagagaatgctgaaggtcttgataagtctaatgatggtgaagaggccgatcag
gtccccgaaggttccgtgactactggtgagactgcttccaccagttcagctatagaacct
gacatctcaaggcaacctagttccagtgcaacgacgactgaggcaaaacaggcatcccct
cctgcaagtaatgcctcacatatagtaaacctacgggagcgagcaagggagagggctatg
caaagacaagctggagcaatgccttctacagtgatcagaggccgtggcagaccggcagga
cgtggtcgcggcgtacgtggtggccgcagcggacggggacaaagtcctgctcagcaatga

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