Citrus sinensis (Valencia orange): 102623649
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Entry
102623649 CDS
T02983
Name
(RefSeq) probable pectate lyase 19
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102623649
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102623649
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
102623649
NCBI-ProteinID:
XP_024955842
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All DBs
Position
6:complement(join(12817055..12817279,12817435..12817677,12817832..12818483,12818639..12818874))
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AA seq
451 aa
AA seq
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MELTKLRLFFLFSFAALIPCLSANISEVDEVWRRRAEEAMQTTEQYYDPNPVAIASHLNM
KVQEYVNNITNIKSSYLLALSKQTAARRGLLNAESGQCEATNPIDNCWRCKENWAENRQA
LAGCALGFGIKATGGKGGKIYEVTDPSDNDMENPKVGTLRHAVIQKEPLWIIFAKDMNIK
LQQELIVQGKKTIDGRGANVHIANGAGFMLQFVQNVIIHGIHIHNISPRSGGMIRDSVDH
VGKRGQSDGDAVSIFGSSNIWLDHLTLSQAHDGLIDAIQASTAITISNCHFSNHDKAILL
GASDTFTEDKKMQVTVAFNRFDKGLVQRMPCVRFGFAHVVNNDYNQWEMYAIGGLKGPTI
LSQGNRFFASDNQNTKEVTKRMNCSPEEGKNWIWRSEGDVFLNGAYFNSSGDPKKQIEYQ
MDDVIKPKPGTEVERITKFAGALVCKPGQKC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggagctaactaagctaagattattctttctcttctcttttgccgctttgatcccttgc
ctatcagctaatatcagtgaggtcgatgaggtatggaggagacgagctgaagaagccatg
cagaccactgagcagtactatgatccaaaccccgtagctattgccagccacctgaacatg
aaagttcaagagtacgtgaataacattactaatattaaaagctcttacctgttagctttg
tcaaagcagactgctgctaggaggggcttgttgaatgcagaatcagggcaatgcgaggca
acaaatccaattgacaattgctggcgttgtaaagagaactgggcagaaaatcgacaagcg
ttggcgggttgcgcactcggtttcggcatcaaagccactggaggaaaaggtggaaaaatt
tatgaggtgactgatccttctgacaatgacatggagaaccctaaggttgggactctacga
catgcagtgatccaaaaagaacctttatggatcatctttgccaaggatatgaacattaag
ttgcaacaagaattgattgtccagggtaagaagaccatagatgggcgtggggccaatgta
cacattgccaatggagctggatttatgctgcagtttgtgcaaaatgtgatcattcatggg
attcatattcataacatttctcctcgcagtggtggtatgattagggactctgtggatcat
gtgggaaagaggggtcaaagtgatggggacgctgtttcaatatttggttcgtcaaatatt
tggcttgatcatcttacattatctcaagcccatgacgggctcattgatgccattcaagca
tccacagccattaccatttcaaactgccacttctccaaccatgataaggcaattttgcta
ggtgcaagtgatactttcacagaagataaaaaaatgcaagtgactgtagcatttaatcgt
tttgataagggactggttcaaagaatgccatgtgtcagatttggtttcgctcatgttgtg
aacaatgattacaatcaatgggaaatgtatgcaattggtggtctcaaaggccccaccatt
cttagccagggtaataggttctttgcctcagataaccaaaataccaaagaggtgaccaag
agaatgaattgcagccctgaagaagggaagaattggatatggagatcggagggagatgta
tttttgaatggggcttattttaattcatctggtgacccaaaaaagcaaatcgaataccaa
atggatgatgtaattaaaccaaagccaggaacagaagttgagaggatcacaaaattcgct
ggggcacttgtttgcaagccaggccagaaatgttaa
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