Citrus sinensis (Valencia orange): 102623826
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Entry
102623826 CDS
T02983
Name
(RefSeq) eukaryotic initiation factor 4A-15-like
KO
K03257
translation initiation factor 4A
Organism
cit
Citrus sinensis (Valencia orange)
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cit03019
]
102623826
03012 Translation factors [BR:
cit03012
]
102623826
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cit04147
]
102623826
Messenger RNA biogenesis [BR:
cit03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
102623826
mRNA cycle factors
Stress granule specific factors
102623826
Translation factors [BR:
cit03012
]
Eukaryotic type
Initiation factors
eIF-4
102623826
Exosome [BR:
cit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102623826
Exosomal proteins of bladder cancer cells
102623826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Flavi_DEAD
LPD39
DUF2780
Motif
Other DBs
NCBI-GeneID:
102623826
NCBI-ProteinID:
XP_024953269
LinkDB
All DBs
Position
9:complement(join(30768513..30769148,30769335..30769765,30769845..30769951,30770076..30770143))
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AA seq
413 aa
AA seq
DB search
MAGIAPEGSGFDARSFDSNMNNLLSEEGQDFFVSYDEVYDSFDSMGLKENLLRGIYAYGF
EKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYESLQCQALVLAPTREL
AQQIEKVMRALGDYMGVKVHACVGGTSVREDQRILSAGVHVVVGTPGRVFDMLRRQSLRP
DYIRMFVLDEADEMLSRGFKDQIYDIFQHLPGKIQVGVFSATMPPEALEITRKFMNKPVR
ILVKRDELTLEGIKQFHVNVDKEEWKLDTLCDLYETLAITQSVIFVNTRRKVDWLTDQMR
SRDHTVSATHGDMDQNSRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQP
ENYLHRIGRSGRFGRKGVAINFVTRDDDRMLTDIQRFYNVVIEELPANVADLI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaatagcgcctgaaggatcggggtttgatgcacgttcttttgatagcaatatg
aacaacttgctttcagaagaaggacaagactttttcgtgtcgtatgatgaagtttatgat
agttttgacagtatgggtttgaaagagaacctccttagaggcatctatgcatatgggttt
gagaagccgtctgcaattcaacaacgaggaattgtgccgttctgcaaaggtctggacgta
attcagcaagcacaatcgggtacgggtaaaacggcaactttctgctctggcattctgcag
cagctggattatgaatcactgcaatgccaagctttggttctcgccccgactagagagctt
gctcagcagattgaaaaggtcatgcgtgccctcggtgattatatgggcgtcaaggttcat
gcctgtgttggtgggaccagcgttcgtgaagatcagagaattctttctgctggggtacat
gtcgttgtgggcactcctggtcgagtttttgacatgttgcgcaggcagtctcttcgccca
gactacataagaatgttcgtcctggatgaagctgatgaaatgctttctagaggtttcaag
gatcagatctatgatattttccagcatctaccaggaaaaattcaggttggtgtgttttct
gcgacaatgccacctgaggcacttgaaattacacgtaaatttatgaataaaccggtgagg
atcctggtaaagcgcgatgagctgaccctggagggtattaagcaatttcatgtgaatgtg
gataaggaggagtggaagctggacacactgtgtgacctttacgagaccctggcgatcact
cagagcgtgatctttgtgaacaccagacgcaaggttgattggctaactgaccagatgagg
agccgcgaccacacagtatcagccacccacggagacatggaccaaaactcgagggatatc
attatgcgtgaattccgttcgggatcttctcgtgtgctcatcaccactgatctcttggct
cggggcatcgacgtccaacaggtctccctcgtcatcaactatgatttgccaactcaacca
gagaactaccttcacaggattggacgcagtggacgatttggaaggaaaggcgttgccatc
aactttgtgacgcgggatgatgataggatgcttactgacattcagagattctacaatgtg
gtgattgaggagctgcctgctaatgtggctgatttgatttga
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