Citrus sinensis (Valencia orange): 102624695
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Entry
102624695 CDS
T02983
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cit
Citrus sinensis (Valencia orange)
Pathway
cit00040
Pentose and glucuronate interconversions
cit01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cit00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102624695
Enzymes [BR:
cit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102624695
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
102624695
NCBI-ProteinID:
XP_006480190
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All DBs
Position
3:join(41881380..41881483,41881577..41881630,41882231..41882308,41883809..41884451,41884553..41884656,41884751..41884889,41884988..41885209)
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AA seq
447 aa
AA seq
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MVVSYQLRYSVCTLLILWLFVTANASTEKHELDSRFLKNEQLQSSNNSSMPERIEFDDEE
WTHEHAVDNPDEIAATVDMAIRNSTERRKLGYFSCGTGNPIDDCWRCDSRWYLRRKRLAD
CAIGFGRNAIGGRDGRYYVVSDPGDDDAVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQ
ELIMNSFKTIDGRGVNVHIANGACITIQFITNVIIHGINIHDCKPTGNAMVRSSPSHYGW
RTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISNNYFTHHNEVMLLGHS
DSYTRDKVMQVTITYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQ
GNRYLAPENTFAKEVTKRVDTSTAVWRGWNWRSEGDLLLNGAYFTPSGAGSGASYARASS
LGAKSSSLVGTLTSNAGALRCRRGRLC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggtggtttcttatcaactacggtactctgtatgtacattgctgattctatggctgttt
gttacggctaatgcctcaacggagaagcacgagctagattcaaggttcttgaaaaatgag
cagttgcagagctcgaacaactcatcaatgccggagaggattgaattcgatgatgaggag
tggactcatgagcacgccgttgataatccggatgaaattgctgctacggtggacatggca
attcgcaatagcactgaaaggagaaaattgggatatttctcatgtggaaccggcaaccca
attgatgattgctggcgctgtgatagccggtggtatttgcgccgaaagcggcttgctgac
tgtgccatcggttttggacgcaacgccatcggtggccgcgatggcaggtattatgttgtt
agcgacccaggggatgatgacgcagttaaccccaaaccaggcacactaaggcacgctgtc
attcaggacaggcctttgtggattgtgttcaagagagacatggtgatcacactcaagcaa
gagcttattatgaacagctttaagacaattgatggccgtggtgtcaatgtacacattgcc
aatggtgcttgcatcaccatccaattcatcacaaatgtcattattcacggcataaatatc
catgactgcaaacctactgggaatgccatggttcgtagctcgccgagtcattatgggtgg
agaacaatggccgatggagatgccatttctatttttggatcaagccatatttggattgat
cacaattctctatctaattgtgctgatggtcttattgatgctattatggggtcaacagca
attaccatctccaacaactacttcacccaccacaacgaggttatgctattgggccacagc
gactcctacactagagacaaggtgatgcaagtgaccataacttacaaccattttggggaa
ggtcttatccaaagaatgccaaggtgtaggcatgggtatttccacgtggtgaacaatgac
tacacacactgggtaatgtatgcgattggtggaagtgctaatcccacgattaacagccag
ggaaacagatatcttgccccagaaaatacttttgctaaagaggttaccaagagggttgac
acgtcaactgctgtatggaggggctggaattggagatcagagggagacctgttgctgaat
ggagcctacttcactccatcaggagctggatccggagccagctacgcaagggcctccagc
ttaggggctaaatcttcttctttggtcggcactcttacatctaatgccggtgcccttaga
tgccgccgtggtcgcctatgctga
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